Gene : Tp57577_TGAC_v2_gene5397 T. pratense v2
Defline:  (1 of 34) PF14009 - Domain of unknown function (DUF4228) (DUF4228) Genomic Order:  3048
Name:  ? Tp57577_TGAC_v2_gene5397 Secondary Identifier:  ? PAC:35972153
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene5397 0.5kb upstream 0.5kb upstream 1233 true Tp57577_TGAC_v2_LG2: 27656877-27658109 Trifolium pratense
Tp57577_TGAC_v2_gene5397 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 27656877-27657376 Trifolium pratense
Tp57577_TGAC_v2_gene5397 0.5kb downstream 0.5kb downstream 1233 true Tp57577_TGAC_v2_LG2: 27657377-27658609 Trifolium pratense
Tp57577_TGAC_v2_gene5397 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 27658110-27658609 Trifolium pratense
Tp57577_TGAC_v2_gene5397 1.0kb upstream 1.0kb upstream 1733 true Tp57577_TGAC_v2_LG2: 27656377-27658109 Trifolium pratense
Tp57577_TGAC_v2_gene5397 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 27656377-27657376 Trifolium pratense
Tp57577_TGAC_v2_gene5397 1.0kb downstream 1.0kb downstream 1733 true Tp57577_TGAC_v2_LG2: 27657377-27659109 Trifolium pratense
Tp57577_TGAC_v2_gene5397 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 27658110-27659109 Trifolium pratense
Tp57577_TGAC_v2_gene5397 2.0kb upstream 2.0kb upstream 2733 true Tp57577_TGAC_v2_LG2: 27655377-27658109 Trifolium pratense
Tp57577_TGAC_v2_gene5397 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 27655377-27657376 Trifolium pratense
Tp57577_TGAC_v2_gene5397 2.0kb downstream 2.0kb downstream 2733 true Tp57577_TGAC_v2_LG2: 27657377-27660109 Trifolium pratense
Tp57577_TGAC_v2_gene5397 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 27658110-27660109 Trifolium pratense
Tp57577_TGAC_v2_gene5397 5.0kb upstream 5.0kb upstream 5733 true Tp57577_TGAC_v2_LG2: 27652377-27658109 Trifolium pratense
Tp57577_TGAC_v2_gene5397 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 27652377-27657376 Trifolium pratense
Tp57577_TGAC_v2_gene5397 5.0kb downstream 5.0kb downstream 5733 true Tp57577_TGAC_v2_LG2: 27657377-27663109 Trifolium pratense
Tp57577_TGAC_v2_gene5397 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 27658110-27663109 Trifolium pratense
Tp57577_TGAC_v2_gene5397 10.0kb upstream 10.0kb upstream 10733 true Tp57577_TGAC_v2_LG2: 27647377-27658109 Trifolium pratense
Tp57577_TGAC_v2_gene5397 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 27647377-27657376 Trifolium pratense
Tp57577_TGAC_v2_gene5397 10.0kb downstream 10.0kb downstream 10733 true Tp57577_TGAC_v2_LG2: 27657377-27668109 Trifolium pratense
Tp57577_TGAC_v2_gene5397 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 27658110-27668109 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310121 5265 Fabidae View MSA
124069920 5270 Rosid View MSA
123747179 5271 Pentapetalae View MSA
122795412 5272 Eudicot View MSA
122048681 5273 Angiosperm View MSA
121311070 5274 Embryophyte View MSA
123348418 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain