Gene : Tp57577_TGAC_v2_gene5430 T. pratense v2
Defline:  (1 of 4) PTHR31752:SF4 - AUXIN EFFLUX CARRIER COMPONENT 2 Genomic Order:  3073
Name:  ? Tp57577_TGAC_v2_gene5430 Secondary Identifier:  ? PAC:35969863
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene5430 0.5kb upstream 0.5kb upstream 3270 true Tp57577_TGAC_v2_LG2: 27812837-27816106 Trifolium pratense
Tp57577_TGAC_v2_gene5430 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 27815607-27816106 Trifolium pratense
Tp57577_TGAC_v2_gene5430 0.5kb downstream 0.5kb downstream 3270 true Tp57577_TGAC_v2_LG2: 27812337-27815606 Trifolium pratense
Tp57577_TGAC_v2_gene5430 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 27812337-27812836 Trifolium pratense
Tp57577_TGAC_v2_gene5430 1.0kb upstream 1.0kb upstream 3770 true Tp57577_TGAC_v2_LG2: 27812837-27816606 Trifolium pratense
Tp57577_TGAC_v2_gene5430 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 27815607-27816606 Trifolium pratense
Tp57577_TGAC_v2_gene5430 1.0kb downstream 1.0kb downstream 3770 true Tp57577_TGAC_v2_LG2: 27811837-27815606 Trifolium pratense
Tp57577_TGAC_v2_gene5430 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 27811837-27812836 Trifolium pratense
Tp57577_TGAC_v2_gene5430 2.0kb upstream 2.0kb upstream 4770 true Tp57577_TGAC_v2_LG2: 27812837-27817606 Trifolium pratense
Tp57577_TGAC_v2_gene5430 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 27815607-27817606 Trifolium pratense
Tp57577_TGAC_v2_gene5430 2.0kb downstream 2.0kb downstream 4770 true Tp57577_TGAC_v2_LG2: 27810837-27815606 Trifolium pratense
Tp57577_TGAC_v2_gene5430 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 27810837-27812836 Trifolium pratense
Tp57577_TGAC_v2_gene5430 5.0kb upstream 5.0kb upstream 7770 true Tp57577_TGAC_v2_LG2: 27812837-27820606 Trifolium pratense
Tp57577_TGAC_v2_gene5430 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 27815607-27820606 Trifolium pratense
Tp57577_TGAC_v2_gene5430 5.0kb downstream 5.0kb downstream 7770 true Tp57577_TGAC_v2_LG2: 27807837-27815606 Trifolium pratense
Tp57577_TGAC_v2_gene5430 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 27807837-27812836 Trifolium pratense
Tp57577_TGAC_v2_gene5430 10.0kb upstream 10.0kb upstream 12770 true Tp57577_TGAC_v2_LG2: 27812837-27825606 Trifolium pratense
Tp57577_TGAC_v2_gene5430 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 27815607-27825606 Trifolium pratense
Tp57577_TGAC_v2_gene5430 10.0kb downstream 10.0kb downstream 12770 true Tp57577_TGAC_v2_LG2: 27802837-27815606 Trifolium pratense
Tp57577_TGAC_v2_gene5430 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 27802837-27812836 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304711 5265 Fabidae View MSA
124063005 5270 Rosid View MSA
123747112 5271 Pentapetalae View MSA
122796951 5272 Eudicot View MSA
122046141 5273 Angiosperm View MSA
121351759 5274 Embryophyte View MSA
123382310 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain