Gene : Tp57577_TGAC_v2_gene6616 T. pratense v2
Defline:  (1 of 1) K04706 - E3 SUMO-protein ligase PIAS1 (PIAS1) Genomic Order:  3478
Name:  ? Tp57577_TGAC_v2_gene6616 Secondary Identifier:  ? PAC:35972833
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene6616 0.5kb upstream 0.5kb upstream 8863 true Tp57577_TGAC_v2_LG2: 30881042-30889904 Trifolium pratense
Tp57577_TGAC_v2_gene6616 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 30889405-30889904 Trifolium pratense
Tp57577_TGAC_v2_gene6616 0.5kb downstream 0.5kb downstream 8863 true Tp57577_TGAC_v2_LG2: 30880542-30889404 Trifolium pratense
Tp57577_TGAC_v2_gene6616 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 30880542-30881041 Trifolium pratense
Tp57577_TGAC_v2_gene6616 1.0kb upstream 1.0kb upstream 9363 true Tp57577_TGAC_v2_LG2: 30881042-30890404 Trifolium pratense
Tp57577_TGAC_v2_gene6616 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 30889405-30890404 Trifolium pratense
Tp57577_TGAC_v2_gene6616 1.0kb downstream 1.0kb downstream 9363 true Tp57577_TGAC_v2_LG2: 30880042-30889404 Trifolium pratense
Tp57577_TGAC_v2_gene6616 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 30880042-30881041 Trifolium pratense
Tp57577_TGAC_v2_gene6616 2.0kb upstream 2.0kb upstream 10363 true Tp57577_TGAC_v2_LG2: 30881042-30891404 Trifolium pratense
Tp57577_TGAC_v2_gene6616 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 30889405-30891404 Trifolium pratense
Tp57577_TGAC_v2_gene6616 2.0kb downstream 2.0kb downstream 10363 true Tp57577_TGAC_v2_LG2: 30879042-30889404 Trifolium pratense
Tp57577_TGAC_v2_gene6616 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 30879042-30881041 Trifolium pratense
Tp57577_TGAC_v2_gene6616 5.0kb upstream 5.0kb upstream 13363 true Tp57577_TGAC_v2_LG2: 30881042-30894404 Trifolium pratense
Tp57577_TGAC_v2_gene6616 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 30889405-30894404 Trifolium pratense
Tp57577_TGAC_v2_gene6616 5.0kb downstream 5.0kb downstream 13363 true Tp57577_TGAC_v2_LG2: 30876042-30889404 Trifolium pratense
Tp57577_TGAC_v2_gene6616 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 30876042-30881041 Trifolium pratense
Tp57577_TGAC_v2_gene6616 10.0kb upstream 10.0kb upstream 18363 true Tp57577_TGAC_v2_LG2: 30881042-30899404 Trifolium pratense
Tp57577_TGAC_v2_gene6616 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 30889405-30899404 Trifolium pratense
Tp57577_TGAC_v2_gene6616 10.0kb downstream 10.0kb downstream 18363 true Tp57577_TGAC_v2_LG2: 30871042-30889404 Trifolium pratense
Tp57577_TGAC_v2_gene6616 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 30871042-30881041 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302003 5265 Fabidae View MSA
124062957 5270 Rosid View MSA
123737680 5271 Pentapetalae View MSA
122797749 5272 Eudicot View MSA
122050924 5273 Angiosperm View MSA
121346660 5274 Embryophyte View MSA
123426833 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain