Gene : Tp57577_TGAC_v2_gene5361 T. pratense v2

Defline:  (1 of 6) PTHR31062:SF32 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 25-RELATED Genomic Order:  2495
Name:  ? Tp57577_TGAC_v2_gene5361 Secondary Identifier:  ? PAC:35971918

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene5361 0.5kb upstream 0.5kb upstream 2328 true Tp57577_TGAC_v2_LG2: 23390599-23392926 Trifolium pratense
Tp57577_TGAC_v2_gene5361 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 23390599-23391098 Trifolium pratense
Tp57577_TGAC_v2_gene5361 0.5kb downstream 0.5kb downstream 2328 true Tp57577_TGAC_v2_LG2: 23391099-23393426 Trifolium pratense
Tp57577_TGAC_v2_gene5361 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 23392927-23393426 Trifolium pratense
Tp57577_TGAC_v2_gene5361 1.0kb upstream 1.0kb upstream 2828 true Tp57577_TGAC_v2_LG2: 23390099-23392926 Trifolium pratense
Tp57577_TGAC_v2_gene5361 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 23390099-23391098 Trifolium pratense
Tp57577_TGAC_v2_gene5361 1.0kb downstream 1.0kb downstream 2828 true Tp57577_TGAC_v2_LG2: 23391099-23393926 Trifolium pratense
Tp57577_TGAC_v2_gene5361 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 23392927-23393926 Trifolium pratense
Tp57577_TGAC_v2_gene5361 2.0kb upstream 2.0kb upstream 3828 true Tp57577_TGAC_v2_LG2: 23389099-23392926 Trifolium pratense
Tp57577_TGAC_v2_gene5361 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 23389099-23391098 Trifolium pratense
Tp57577_TGAC_v2_gene5361 2.0kb downstream 2.0kb downstream 3828 true Tp57577_TGAC_v2_LG2: 23391099-23394926 Trifolium pratense
Tp57577_TGAC_v2_gene5361 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 23392927-23394926 Trifolium pratense
Tp57577_TGAC_v2_gene5361 5.0kb upstream 5.0kb upstream 6828 true Tp57577_TGAC_v2_LG2: 23386099-23392926 Trifolium pratense
Tp57577_TGAC_v2_gene5361 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 23386099-23391098 Trifolium pratense
Tp57577_TGAC_v2_gene5361 5.0kb downstream 5.0kb downstream 6828 true Tp57577_TGAC_v2_LG2: 23391099-23397926 Trifolium pratense
Tp57577_TGAC_v2_gene5361 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 23392927-23397926 Trifolium pratense
Tp57577_TGAC_v2_gene5361 10.0kb upstream 10.0kb upstream 11828 true Tp57577_TGAC_v2_LG2: 23381099-23392926 Trifolium pratense
Tp57577_TGAC_v2_gene5361 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 23381099-23391098 Trifolium pratense
Tp57577_TGAC_v2_gene5361 10.0kb downstream 10.0kb downstream 11828 true Tp57577_TGAC_v2_LG2: 23391099-23402926 Trifolium pratense
Tp57577_TGAC_v2_gene5361 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 23392927-23402926 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314173 5265 Fabidae View MSA
124074397 5270 Rosid View MSA
123749278 5271 Pentapetalae View MSA
122796709 5272 Eudicot View MSA
122046395 5273 Angiosperm View MSA
121350333 5274 Embryophyte View MSA
123381682 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain