Gene : Tp57577_TGAC_v2_gene5344 T. pratense v2
Defline:  (1 of 1) PTHR10231:SF48 - CMP-SIALIC ACID TRANSPORTER 1 Genomic Order:  2522
Name:  ? Tp57577_TGAC_v2_gene5344 Secondary Identifier:  ? PAC:35969555
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene5344 0.5kb upstream 0.5kb upstream 6780 true Tp57577_TGAC_v2_LG2: 23615028-23621807 Trifolium pratense
Tp57577_TGAC_v2_gene5344 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 23621308-23621807 Trifolium pratense
Tp57577_TGAC_v2_gene5344 0.5kb downstream 0.5kb downstream 6780 true Tp57577_TGAC_v2_LG2: 23614528-23621307 Trifolium pratense
Tp57577_TGAC_v2_gene5344 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 23614528-23615027 Trifolium pratense
Tp57577_TGAC_v2_gene5344 1.0kb upstream 1.0kb upstream 7280 true Tp57577_TGAC_v2_LG2: 23615028-23622307 Trifolium pratense
Tp57577_TGAC_v2_gene5344 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 23621308-23622307 Trifolium pratense
Tp57577_TGAC_v2_gene5344 1.0kb downstream 1.0kb downstream 7280 true Tp57577_TGAC_v2_LG2: 23614028-23621307 Trifolium pratense
Tp57577_TGAC_v2_gene5344 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 23614028-23615027 Trifolium pratense
Tp57577_TGAC_v2_gene5344 2.0kb upstream 2.0kb upstream 8280 true Tp57577_TGAC_v2_LG2: 23615028-23623307 Trifolium pratense
Tp57577_TGAC_v2_gene5344 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 23621308-23623307 Trifolium pratense
Tp57577_TGAC_v2_gene5344 2.0kb downstream 2.0kb downstream 8280 true Tp57577_TGAC_v2_LG2: 23613028-23621307 Trifolium pratense
Tp57577_TGAC_v2_gene5344 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 23613028-23615027 Trifolium pratense
Tp57577_TGAC_v2_gene5344 5.0kb upstream 5.0kb upstream 11280 true Tp57577_TGAC_v2_LG2: 23615028-23626307 Trifolium pratense
Tp57577_TGAC_v2_gene5344 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 23621308-23626307 Trifolium pratense
Tp57577_TGAC_v2_gene5344 5.0kb downstream 5.0kb downstream 11280 true Tp57577_TGAC_v2_LG2: 23610028-23621307 Trifolium pratense
Tp57577_TGAC_v2_gene5344 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 23610028-23615027 Trifolium pratense
Tp57577_TGAC_v2_gene5344 10.0kb upstream 10.0kb upstream 16280 true Tp57577_TGAC_v2_LG2: 23615028-23631307 Trifolium pratense
Tp57577_TGAC_v2_gene5344 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 23621308-23631307 Trifolium pratense
Tp57577_TGAC_v2_gene5344 10.0kb downstream 10.0kb downstream 16280 true Tp57577_TGAC_v2_LG2: 23605028-23621307 Trifolium pratense
Tp57577_TGAC_v2_gene5344 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 23605028-23615027 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305503 5265 Fabidae View MSA
124063964 5270 Rosid View MSA
123739644 5271 Pentapetalae View MSA
122792933 5272 Eudicot View MSA
122041712 5273 Angiosperm View MSA
123429066 5275 Viridiplantae View MSA
121351158 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain