Gene : Tp57577_TGAC_v2_gene32588 T. pratense v2
Defline:  (1 of 2) K11644 - paired amphipathic helix protein Sin3a (SIN3A) Genomic Order:  14
Name:  ? Tp57577_TGAC_v2_gene32588 Secondary Identifier:  ? PAC:35981498
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene32588 0.5kb upstream 0.5kb upstream 11546 true Tp57577_TGAC_v2_scaf_181: 123316-134861 Trifolium pratense
Tp57577_TGAC_v2_gene32588 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_181: 123316-123815 Trifolium pratense
Tp57577_TGAC_v2_gene32588 0.5kb downstream 0.5kb downstream 11546 true Tp57577_TGAC_v2_scaf_181: 123816-135361 Trifolium pratense
Tp57577_TGAC_v2_gene32588 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_181: 134862-135361 Trifolium pratense
Tp57577_TGAC_v2_gene32588 1.0kb upstream 1.0kb upstream 12046 true Tp57577_TGAC_v2_scaf_181: 122816-134861 Trifolium pratense
Tp57577_TGAC_v2_gene32588 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_181: 122816-123815 Trifolium pratense
Tp57577_TGAC_v2_gene32588 1.0kb downstream 1.0kb downstream 12046 true Tp57577_TGAC_v2_scaf_181: 123816-135861 Trifolium pratense
Tp57577_TGAC_v2_gene32588 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_181: 134862-135861 Trifolium pratense
Tp57577_TGAC_v2_gene32588 2.0kb upstream 2.0kb upstream 13046 true Tp57577_TGAC_v2_scaf_181: 121816-134861 Trifolium pratense
Tp57577_TGAC_v2_gene32588 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_181: 121816-123815 Trifolium pratense
Tp57577_TGAC_v2_gene32588 2.0kb downstream 2.0kb downstream 13046 true Tp57577_TGAC_v2_scaf_181: 123816-136861 Trifolium pratense
Tp57577_TGAC_v2_gene32588 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_181: 134862-136861 Trifolium pratense
Tp57577_TGAC_v2_gene32588 5.0kb upstream 5.0kb upstream 16046 true Tp57577_TGAC_v2_scaf_181: 118816-134861 Trifolium pratense
Tp57577_TGAC_v2_gene32588 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_181: 118816-123815 Trifolium pratense
Tp57577_TGAC_v2_gene32588 5.0kb downstream 5.0kb downstream 16046 true Tp57577_TGAC_v2_scaf_181: 123816-139861 Trifolium pratense
Tp57577_TGAC_v2_gene32588 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_181: 134862-139861 Trifolium pratense
Tp57577_TGAC_v2_gene32588 10.0kb upstream 10.0kb upstream 21046 true Tp57577_TGAC_v2_scaf_181: 113816-134861 Trifolium pratense
Tp57577_TGAC_v2_gene32588 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_181: 113816-123815 Trifolium pratense
Tp57577_TGAC_v2_gene32588 10.0kb downstream 10.0kb downstream 21046 true Tp57577_TGAC_v2_scaf_181: 123816-144861 Trifolium pratense
Tp57577_TGAC_v2_gene32588 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_181: 134862-144861 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308995 5265 Fabidae View MSA
124072493 5270 Rosid View MSA
123752813 5271 Pentapetalae View MSA
122791038 5272 Eudicot View MSA
122047034 5273 Angiosperm View MSA
121346152 5274 Embryophyte View MSA
123428507 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain