Gene : Tp57577_TGAC_v2_gene37863 T. pratense v2
Defline:  (1 of 35) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  3639
Name:  ? Tp57577_TGAC_v2_gene37863 Secondary Identifier:  ? PAC:35972852
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene37863 0.5kb upstream 0.5kb upstream 3069 true Tp57577_TGAC_v2_LG2: 31993255-31996323 Trifolium pratense
Tp57577_TGAC_v2_gene37863 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 31995824-31996323 Trifolium pratense
Tp57577_TGAC_v2_gene37863 0.5kb downstream 0.5kb downstream 3069 true Tp57577_TGAC_v2_LG2: 31992755-31995823 Trifolium pratense
Tp57577_TGAC_v2_gene37863 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 31992755-31993254 Trifolium pratense
Tp57577_TGAC_v2_gene37863 1.0kb upstream 1.0kb upstream 3569 true Tp57577_TGAC_v2_LG2: 31993255-31996823 Trifolium pratense
Tp57577_TGAC_v2_gene37863 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 31995824-31996823 Trifolium pratense
Tp57577_TGAC_v2_gene37863 1.0kb downstream 1.0kb downstream 3569 true Tp57577_TGAC_v2_LG2: 31992255-31995823 Trifolium pratense
Tp57577_TGAC_v2_gene37863 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 31992255-31993254 Trifolium pratense
Tp57577_TGAC_v2_gene37863 2.0kb upstream 2.0kb upstream 4569 true Tp57577_TGAC_v2_LG2: 31993255-31997823 Trifolium pratense
Tp57577_TGAC_v2_gene37863 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 31995824-31997823 Trifolium pratense
Tp57577_TGAC_v2_gene37863 2.0kb downstream 2.0kb downstream 4569 true Tp57577_TGAC_v2_LG2: 31991255-31995823 Trifolium pratense
Tp57577_TGAC_v2_gene37863 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 31991255-31993254 Trifolium pratense
Tp57577_TGAC_v2_gene37863 5.0kb upstream 5.0kb upstream 7569 true Tp57577_TGAC_v2_LG2: 31993255-32000823 Trifolium pratense
Tp57577_TGAC_v2_gene37863 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 31995824-32000823 Trifolium pratense
Tp57577_TGAC_v2_gene37863 5.0kb downstream 5.0kb downstream 7569 true Tp57577_TGAC_v2_LG2: 31988255-31995823 Trifolium pratense
Tp57577_TGAC_v2_gene37863 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 31988255-31993254 Trifolium pratense
Tp57577_TGAC_v2_gene37863 10.0kb upstream 10.0kb upstream 12569 true Tp57577_TGAC_v2_LG2: 31993255-32005823 Trifolium pratense
Tp57577_TGAC_v2_gene37863 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 31995824-32005823 Trifolium pratense
Tp57577_TGAC_v2_gene37863 10.0kb downstream 10.0kb downstream 12569 true Tp57577_TGAC_v2_LG2: 31983255-31995823 Trifolium pratense
Tp57577_TGAC_v2_gene37863 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 31983255-31993254 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304903 5265 Fabidae View MSA
124067388 5270 Rosid View MSA
123740629 5271 Pentapetalae View MSA
122786381 5272 Eudicot View MSA
122046453 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121310608 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain