Gene : Tp57577_TGAC_v2_gene38289 T. pratense v2
Defline:  (1 of 2) PTHR12385:SF36 - PLASMA-MEMBRANE CHOLINE TRANSPORTER-LIKE PROTEIN Genomic Order:  2063
Name:  ? Tp57577_TGAC_v2_gene38289 Secondary Identifier:  ? PAC:35973300
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene38289 0.5kb upstream 0.5kb upstream 5257 true Tp57577_TGAC_v2_LG2: 19695793-19701049 Trifolium pratense
Tp57577_TGAC_v2_gene38289 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 19695793-19696292 Trifolium pratense
Tp57577_TGAC_v2_gene38289 0.5kb downstream 0.5kb downstream 5257 true Tp57577_TGAC_v2_LG2: 19696293-19701549 Trifolium pratense
Tp57577_TGAC_v2_gene38289 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 19701050-19701549 Trifolium pratense
Tp57577_TGAC_v2_gene38289 1.0kb upstream 1.0kb upstream 5757 true Tp57577_TGAC_v2_LG2: 19695293-19701049 Trifolium pratense
Tp57577_TGAC_v2_gene38289 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 19695293-19696292 Trifolium pratense
Tp57577_TGAC_v2_gene38289 1.0kb downstream 1.0kb downstream 5757 true Tp57577_TGAC_v2_LG2: 19696293-19702049 Trifolium pratense
Tp57577_TGAC_v2_gene38289 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 19701050-19702049 Trifolium pratense
Tp57577_TGAC_v2_gene38289 2.0kb upstream 2.0kb upstream 6757 true Tp57577_TGAC_v2_LG2: 19694293-19701049 Trifolium pratense
Tp57577_TGAC_v2_gene38289 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 19694293-19696292 Trifolium pratense
Tp57577_TGAC_v2_gene38289 2.0kb downstream 2.0kb downstream 6757 true Tp57577_TGAC_v2_LG2: 19696293-19703049 Trifolium pratense
Tp57577_TGAC_v2_gene38289 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 19701050-19703049 Trifolium pratense
Tp57577_TGAC_v2_gene38289 5.0kb upstream 5.0kb upstream 9757 true Tp57577_TGAC_v2_LG2: 19691293-19701049 Trifolium pratense
Tp57577_TGAC_v2_gene38289 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 19691293-19696292 Trifolium pratense
Tp57577_TGAC_v2_gene38289 5.0kb downstream 5.0kb downstream 9757 true Tp57577_TGAC_v2_LG2: 19696293-19706049 Trifolium pratense
Tp57577_TGAC_v2_gene38289 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 19701050-19706049 Trifolium pratense
Tp57577_TGAC_v2_gene38289 10.0kb upstream 10.0kb upstream 14757 true Tp57577_TGAC_v2_LG2: 19686293-19701049 Trifolium pratense
Tp57577_TGAC_v2_gene38289 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 19686293-19696292 Trifolium pratense
Tp57577_TGAC_v2_gene38289 10.0kb downstream 10.0kb downstream 14757 true Tp57577_TGAC_v2_LG2: 19696293-19711049 Trifolium pratense
Tp57577_TGAC_v2_gene38289 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 19701050-19711049 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296575 5265 Fabidae View MSA
124063041 5270 Rosid View MSA
123736673 5271 Pentapetalae View MSA
122792379 5272 Eudicot View MSA
122042832 5273 Angiosperm View MSA
121344178 5274 Embryophyte View MSA
123428325 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain