Gene : Tp57577_TGAC_v2_gene38256 T. pratense v2
Defline:  (1 of 1) K02434 - aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B (gatB, PET112) Genomic Order:  2086
Name:  ? Tp57577_TGAC_v2_gene38256 Secondary Identifier:  ? PAC:35971820
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5921 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene38256 0.5kb upstream 0.5kb upstream 7414 true Tp57577_TGAC_v2_LG2: 19870059-19877472 Trifolium pratense
Tp57577_TGAC_v2_gene38256 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 19876973-19877472 Trifolium pratense
Tp57577_TGAC_v2_gene38256 0.5kb downstream 0.5kb downstream 7414 true Tp57577_TGAC_v2_LG2: 19869559-19876972 Trifolium pratense
Tp57577_TGAC_v2_gene38256 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 19869559-19870058 Trifolium pratense
Tp57577_TGAC_v2_gene38256 1.0kb upstream 1.0kb upstream 7914 true Tp57577_TGAC_v2_LG2: 19870059-19877972 Trifolium pratense
Tp57577_TGAC_v2_gene38256 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 19876973-19877972 Trifolium pratense
Tp57577_TGAC_v2_gene38256 1.0kb downstream 1.0kb downstream 7914 true Tp57577_TGAC_v2_LG2: 19869059-19876972 Trifolium pratense
Tp57577_TGAC_v2_gene38256 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 19869059-19870058 Trifolium pratense
Tp57577_TGAC_v2_gene38256 2.0kb upstream 2.0kb upstream 8914 true Tp57577_TGAC_v2_LG2: 19870059-19878972 Trifolium pratense
Tp57577_TGAC_v2_gene38256 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 19876973-19878972 Trifolium pratense
Tp57577_TGAC_v2_gene38256 2.0kb downstream 2.0kb downstream 8914 true Tp57577_TGAC_v2_LG2: 19868059-19876972 Trifolium pratense
Tp57577_TGAC_v2_gene38256 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 19868059-19870058 Trifolium pratense
Tp57577_TGAC_v2_gene38256 5.0kb upstream 5.0kb upstream 11914 true Tp57577_TGAC_v2_LG2: 19870059-19881972 Trifolium pratense
Tp57577_TGAC_v2_gene38256 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 19876973-19881972 Trifolium pratense
Tp57577_TGAC_v2_gene38256 5.0kb downstream 5.0kb downstream 11914 true Tp57577_TGAC_v2_LG2: 19865059-19876972 Trifolium pratense
Tp57577_TGAC_v2_gene38256 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 19865059-19870058 Trifolium pratense
Tp57577_TGAC_v2_gene38256 10.0kb upstream 10.0kb upstream 16914 true Tp57577_TGAC_v2_LG2: 19870059-19886972 Trifolium pratense
Tp57577_TGAC_v2_gene38256 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 19876973-19886972 Trifolium pratense
Tp57577_TGAC_v2_gene38256 10.0kb downstream 10.0kb downstream 16914 true Tp57577_TGAC_v2_LG2: 19860059-19876972 Trifolium pratense
Tp57577_TGAC_v2_gene38256 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 19860059-19870058 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304937 5265 Fabidae View MSA
124063179 5270 Rosid View MSA
123739880 5271 Pentapetalae View MSA
122793755 5272 Eudicot View MSA
122043391 5273 Angiosperm View MSA
121346505 5274 Embryophyte View MSA
123423998 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain