Gene : Tp57577_TGAC_v2_gene38263 T. pratense v2
Defline:  (1 of 2) PTHR31419:SF2 - AUXIN EFFLUX CARRIER FAMILY PROTEIN Genomic Order:  2067
Name:  ? Tp57577_TGAC_v2_gene38263 Secondary Identifier:  ? PAC:35972040
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene38263 0.5kb upstream 0.5kb upstream 2669 true Tp57577_TGAC_v2_LG2: 19723494-19726162 Trifolium pratense
Tp57577_TGAC_v2_gene38263 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 19725663-19726162 Trifolium pratense
Tp57577_TGAC_v2_gene38263 0.5kb downstream 0.5kb downstream 2669 true Tp57577_TGAC_v2_LG2: 19722994-19725662 Trifolium pratense
Tp57577_TGAC_v2_gene38263 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 19722994-19723493 Trifolium pratense
Tp57577_TGAC_v2_gene38263 1.0kb upstream 1.0kb upstream 3169 true Tp57577_TGAC_v2_LG2: 19723494-19726662 Trifolium pratense
Tp57577_TGAC_v2_gene38263 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 19725663-19726662 Trifolium pratense
Tp57577_TGAC_v2_gene38263 1.0kb downstream 1.0kb downstream 3169 true Tp57577_TGAC_v2_LG2: 19722494-19725662 Trifolium pratense
Tp57577_TGAC_v2_gene38263 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 19722494-19723493 Trifolium pratense
Tp57577_TGAC_v2_gene38263 2.0kb upstream 2.0kb upstream 4169 true Tp57577_TGAC_v2_LG2: 19723494-19727662 Trifolium pratense
Tp57577_TGAC_v2_gene38263 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 19725663-19727662 Trifolium pratense
Tp57577_TGAC_v2_gene38263 2.0kb downstream 2.0kb downstream 4169 true Tp57577_TGAC_v2_LG2: 19721494-19725662 Trifolium pratense
Tp57577_TGAC_v2_gene38263 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 19721494-19723493 Trifolium pratense
Tp57577_TGAC_v2_gene38263 5.0kb upstream 5.0kb upstream 7169 true Tp57577_TGAC_v2_LG2: 19723494-19730662 Trifolium pratense
Tp57577_TGAC_v2_gene38263 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 19725663-19730662 Trifolium pratense
Tp57577_TGAC_v2_gene38263 5.0kb downstream 5.0kb downstream 7169 true Tp57577_TGAC_v2_LG2: 19718494-19725662 Trifolium pratense
Tp57577_TGAC_v2_gene38263 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 19718494-19723493 Trifolium pratense
Tp57577_TGAC_v2_gene38263 10.0kb upstream 10.0kb upstream 12169 true Tp57577_TGAC_v2_LG2: 19723494-19735662 Trifolium pratense
Tp57577_TGAC_v2_gene38263 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 19725663-19735662 Trifolium pratense
Tp57577_TGAC_v2_gene38263 10.0kb downstream 10.0kb downstream 12169 true Tp57577_TGAC_v2_LG2: 19713494-19725662 Trifolium pratense
Tp57577_TGAC_v2_gene38263 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 19713494-19723493 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304873 5265 Fabidae View MSA
124070686 5270 Rosid View MSA
123745626 5271 Pentapetalae View MSA
122796899 5272 Eudicot View MSA
122045179 5273 Angiosperm View MSA
123429004 5275 Viridiplantae View MSA
121343844 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain