Gene : Tp57577_TGAC_v2_gene38055 T. pratense v2
Defline:  (1 of 3) PTHR10314//PTHR10314:SF101 - SER/THR DEHYDRATASE, TRP SYNTHASE // SUBFAMILY NOT NAMED Genomic Order:  3679
Name:  ? Tp57577_TGAC_v2_gene38055 Secondary Identifier:  ? PAC:35972522
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense CYSTSYN-PWY Trifolium pratense pathologic  
Tpratense PWY-6936 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene38055 0.5kb upstream 0.5kb upstream 5107 true Tp57577_TGAC_v2_LG2: 32200486-32205592 Trifolium pratense
Tp57577_TGAC_v2_gene38055 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 32205093-32205592 Trifolium pratense
Tp57577_TGAC_v2_gene38055 0.5kb downstream 0.5kb downstream 5107 true Tp57577_TGAC_v2_LG2: 32199986-32205092 Trifolium pratense
Tp57577_TGAC_v2_gene38055 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 32199986-32200485 Trifolium pratense
Tp57577_TGAC_v2_gene38055 1.0kb upstream 1.0kb upstream 5607 true Tp57577_TGAC_v2_LG2: 32200486-32206092 Trifolium pratense
Tp57577_TGAC_v2_gene38055 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 32205093-32206092 Trifolium pratense
Tp57577_TGAC_v2_gene38055 1.0kb downstream 1.0kb downstream 5607 true Tp57577_TGAC_v2_LG2: 32199486-32205092 Trifolium pratense
Tp57577_TGAC_v2_gene38055 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 32199486-32200485 Trifolium pratense
Tp57577_TGAC_v2_gene38055 2.0kb upstream 2.0kb upstream 6607 true Tp57577_TGAC_v2_LG2: 32200486-32207092 Trifolium pratense
Tp57577_TGAC_v2_gene38055 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 32205093-32207092 Trifolium pratense
Tp57577_TGAC_v2_gene38055 2.0kb downstream 2.0kb downstream 6607 true Tp57577_TGAC_v2_LG2: 32198486-32205092 Trifolium pratense
Tp57577_TGAC_v2_gene38055 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 32198486-32200485 Trifolium pratense
Tp57577_TGAC_v2_gene38055 5.0kb upstream 5.0kb upstream 9607 true Tp57577_TGAC_v2_LG2: 32200486-32210092 Trifolium pratense
Tp57577_TGAC_v2_gene38055 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 32205093-32210092 Trifolium pratense
Tp57577_TGAC_v2_gene38055 5.0kb downstream 5.0kb downstream 9607 true Tp57577_TGAC_v2_LG2: 32195486-32205092 Trifolium pratense
Tp57577_TGAC_v2_gene38055 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 32195486-32200485 Trifolium pratense
Tp57577_TGAC_v2_gene38055 10.0kb upstream 10.0kb upstream 14607 true Tp57577_TGAC_v2_LG2: 32200486-32215092 Trifolium pratense
Tp57577_TGAC_v2_gene38055 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 32205093-32215092 Trifolium pratense
Tp57577_TGAC_v2_gene38055 10.0kb downstream 10.0kb downstream 14607 true Tp57577_TGAC_v2_LG2: 32190486-32205092 Trifolium pratense
Tp57577_TGAC_v2_gene38055 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 32190486-32200485 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312558 5265 Fabidae View MSA
124073485 5270 Rosid View MSA
123750353 5271 Pentapetalae View MSA
122787082 5272 Eudicot View MSA
122044204 5273 Angiosperm View MSA
121350970 5274 Embryophyte View MSA
123424805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain