Gene : Tp57577_TGAC_v2_gene38253 T. pratense v2
Defline:  (1 of 1) PTHR23089:SF3 - HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN 1 Genomic Order:  2119
Name:  ? Tp57577_TGAC_v2_gene38253 Secondary Identifier:  ? PAC:35969736
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene38253 0.5kb upstream 0.5kb upstream 2986 true Tp57577_TGAC_v2_LG2: 20178181-20181166 Trifolium pratense
Tp57577_TGAC_v2_gene38253 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 20180667-20181166 Trifolium pratense
Tp57577_TGAC_v2_gene38253 0.5kb downstream 0.5kb downstream 2986 true Tp57577_TGAC_v2_LG2: 20177681-20180666 Trifolium pratense
Tp57577_TGAC_v2_gene38253 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 20177681-20178180 Trifolium pratense
Tp57577_TGAC_v2_gene38253 1.0kb upstream 1.0kb upstream 3486 true Tp57577_TGAC_v2_LG2: 20178181-20181666 Trifolium pratense
Tp57577_TGAC_v2_gene38253 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 20180667-20181666 Trifolium pratense
Tp57577_TGAC_v2_gene38253 1.0kb downstream 1.0kb downstream 3486 true Tp57577_TGAC_v2_LG2: 20177181-20180666 Trifolium pratense
Tp57577_TGAC_v2_gene38253 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 20177181-20178180 Trifolium pratense
Tp57577_TGAC_v2_gene38253 2.0kb upstream 2.0kb upstream 4486 true Tp57577_TGAC_v2_LG2: 20178181-20182666 Trifolium pratense
Tp57577_TGAC_v2_gene38253 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 20180667-20182666 Trifolium pratense
Tp57577_TGAC_v2_gene38253 2.0kb downstream 2.0kb downstream 4486 true Tp57577_TGAC_v2_LG2: 20176181-20180666 Trifolium pratense
Tp57577_TGAC_v2_gene38253 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 20176181-20178180 Trifolium pratense
Tp57577_TGAC_v2_gene38253 5.0kb upstream 5.0kb upstream 7486 true Tp57577_TGAC_v2_LG2: 20178181-20185666 Trifolium pratense
Tp57577_TGAC_v2_gene38253 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 20180667-20185666 Trifolium pratense
Tp57577_TGAC_v2_gene38253 5.0kb downstream 5.0kb downstream 7486 true Tp57577_TGAC_v2_LG2: 20173181-20180666 Trifolium pratense
Tp57577_TGAC_v2_gene38253 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 20173181-20178180 Trifolium pratense
Tp57577_TGAC_v2_gene38253 10.0kb upstream 10.0kb upstream 12486 true Tp57577_TGAC_v2_LG2: 20178181-20190666 Trifolium pratense
Tp57577_TGAC_v2_gene38253 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 20180667-20190666 Trifolium pratense
Tp57577_TGAC_v2_gene38253 10.0kb downstream 10.0kb downstream 12486 true Tp57577_TGAC_v2_LG2: 20168181-20180666 Trifolium pratense
Tp57577_TGAC_v2_gene38253 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 20168181-20178180 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303854 5265 Fabidae View MSA
124063268 5270 Rosid View MSA
123738121 5271 Pentapetalae View MSA
122789246 5272 Eudicot View MSA
122042822 5273 Angiosperm View MSA
121347396 5274 Embryophyte View MSA
123425482 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain