Gene : Tp57577_TGAC_v2_gene36739 T. pratense v2
Defline:  (1 of 5) K17871 - NADH:ubiquinone reductase (non-electrogenic) (ndh1) Genomic Order:  2431
Name:  ? Tp57577_TGAC_v2_gene36739 Secondary Identifier:  ? PAC:35973225
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7279 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene36739 0.5kb upstream 0.5kb upstream 6729 true Tp57577_TGAC_v2_LG2: 22793576-22800304 Trifolium pratense
Tp57577_TGAC_v2_gene36739 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 22799805-22800304 Trifolium pratense
Tp57577_TGAC_v2_gene36739 0.5kb downstream 0.5kb downstream 6729 true Tp57577_TGAC_v2_LG2: 22793076-22799804 Trifolium pratense
Tp57577_TGAC_v2_gene36739 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 22793076-22793575 Trifolium pratense
Tp57577_TGAC_v2_gene36739 1.0kb upstream 1.0kb upstream 7229 true Tp57577_TGAC_v2_LG2: 22793576-22800804 Trifolium pratense
Tp57577_TGAC_v2_gene36739 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 22799805-22800804 Trifolium pratense
Tp57577_TGAC_v2_gene36739 1.0kb downstream 1.0kb downstream 7229 true Tp57577_TGAC_v2_LG2: 22792576-22799804 Trifolium pratense
Tp57577_TGAC_v2_gene36739 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 22792576-22793575 Trifolium pratense
Tp57577_TGAC_v2_gene36739 2.0kb upstream 2.0kb upstream 8229 true Tp57577_TGAC_v2_LG2: 22793576-22801804 Trifolium pratense
Tp57577_TGAC_v2_gene36739 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 22799805-22801804 Trifolium pratense
Tp57577_TGAC_v2_gene36739 2.0kb downstream 2.0kb downstream 8229 true Tp57577_TGAC_v2_LG2: 22791576-22799804 Trifolium pratense
Tp57577_TGAC_v2_gene36739 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 22791576-22793575 Trifolium pratense
Tp57577_TGAC_v2_gene36739 5.0kb upstream 5.0kb upstream 11229 true Tp57577_TGAC_v2_LG2: 22793576-22804804 Trifolium pratense
Tp57577_TGAC_v2_gene36739 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 22799805-22804804 Trifolium pratense
Tp57577_TGAC_v2_gene36739 5.0kb downstream 5.0kb downstream 11229 true Tp57577_TGAC_v2_LG2: 22788576-22799804 Trifolium pratense
Tp57577_TGAC_v2_gene36739 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 22788576-22793575 Trifolium pratense
Tp57577_TGAC_v2_gene36739 10.0kb upstream 10.0kb upstream 16229 true Tp57577_TGAC_v2_LG2: 22793576-22809804 Trifolium pratense
Tp57577_TGAC_v2_gene36739 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 22799805-22809804 Trifolium pratense
Tp57577_TGAC_v2_gene36739 10.0kb downstream 10.0kb downstream 16229 true Tp57577_TGAC_v2_LG2: 22783576-22799804 Trifolium pratense
Tp57577_TGAC_v2_gene36739 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 22783576-22793575 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313743 5265 Fabidae View MSA
124072571 5270 Rosid View MSA
123740807 5271 Pentapetalae View MSA
122787456 5272 Eudicot View MSA
122046891 5273 Angiosperm View MSA
121348097 5274 Embryophyte View MSA
123427504 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain