Gene : Tp57577_TGAC_v2_gene36994 T. pratense v2
Defline:  (1 of 1) PTHR11946:SF7 - LEUCINE--TRNA LIGASE, MITOCHONDRIAL-RELATED Genomic Order:  2909
Name:  ? Tp57577_TGAC_v2_gene36994 Secondary Identifier:  ? PAC:35970759
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense TRNA-CHARGING-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene36994 0.5kb upstream 0.5kb upstream 9558 true Tp57577_TGAC_v2_LG2: 26563694-26573251 Trifolium pratense
Tp57577_TGAC_v2_gene36994 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 26563694-26564193 Trifolium pratense
Tp57577_TGAC_v2_gene36994 0.5kb downstream 0.5kb downstream 9558 true Tp57577_TGAC_v2_LG2: 26564194-26573751 Trifolium pratense
Tp57577_TGAC_v2_gene36994 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 26573252-26573751 Trifolium pratense
Tp57577_TGAC_v2_gene36994 1.0kb upstream 1.0kb upstream 10058 true Tp57577_TGAC_v2_LG2: 26563194-26573251 Trifolium pratense
Tp57577_TGAC_v2_gene36994 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 26563194-26564193 Trifolium pratense
Tp57577_TGAC_v2_gene36994 1.0kb downstream 1.0kb downstream 10058 true Tp57577_TGAC_v2_LG2: 26564194-26574251 Trifolium pratense
Tp57577_TGAC_v2_gene36994 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 26573252-26574251 Trifolium pratense
Tp57577_TGAC_v2_gene36994 2.0kb upstream 2.0kb upstream 11058 true Tp57577_TGAC_v2_LG2: 26562194-26573251 Trifolium pratense
Tp57577_TGAC_v2_gene36994 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 26562194-26564193 Trifolium pratense
Tp57577_TGAC_v2_gene36994 2.0kb downstream 2.0kb downstream 11058 true Tp57577_TGAC_v2_LG2: 26564194-26575251 Trifolium pratense
Tp57577_TGAC_v2_gene36994 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 26573252-26575251 Trifolium pratense
Tp57577_TGAC_v2_gene36994 5.0kb upstream 5.0kb upstream 14058 true Tp57577_TGAC_v2_LG2: 26559194-26573251 Trifolium pratense
Tp57577_TGAC_v2_gene36994 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 26559194-26564193 Trifolium pratense
Tp57577_TGAC_v2_gene36994 5.0kb downstream 5.0kb downstream 14058 true Tp57577_TGAC_v2_LG2: 26564194-26578251 Trifolium pratense
Tp57577_TGAC_v2_gene36994 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 26573252-26578251 Trifolium pratense
Tp57577_TGAC_v2_gene36994 10.0kb upstream 10.0kb upstream 19058 true Tp57577_TGAC_v2_LG2: 26554194-26573251 Trifolium pratense
Tp57577_TGAC_v2_gene36994 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 26554194-26564193 Trifolium pratense
Tp57577_TGAC_v2_gene36994 10.0kb downstream 10.0kb downstream 19058 true Tp57577_TGAC_v2_LG2: 26564194-26583251 Trifolium pratense
Tp57577_TGAC_v2_gene36994 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 26573252-26583251 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041369 5273 Angiosperm View MSA
122306893 5265 Fabidae View MSA
124073421 5270 Rosid View MSA
123749958 5271 Pentapetalae View MSA
122789048 5272 Eudicot View MSA
121347479 5274 Embryophyte View MSA
123424257 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain