Gene : Tp57577_TGAC_v2_gene32897 T. pratense v2
Defline:  (1 of 3) PTHR10366:SF369 - CINNAMOYL-COA REDUCTASE-LIKE PROTEIN Genomic Order:  36
Name:  ? Tp57577_TGAC_v2_gene32897 Secondary Identifier:  ? PAC:35986900
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-361 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene32897 0.5kb upstream 0.5kb upstream 2455 true Tp57577_TGAC_v2_scaf_184: 355514-357968 Trifolium pratense
Tp57577_TGAC_v2_gene32897 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_184: 355514-356013 Trifolium pratense
Tp57577_TGAC_v2_gene32897 0.5kb downstream 0.5kb downstream 2455 true Tp57577_TGAC_v2_scaf_184: 356014-358468 Trifolium pratense
Tp57577_TGAC_v2_gene32897 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_184: 357969-358468 Trifolium pratense
Tp57577_TGAC_v2_gene32897 1.0kb upstream 1.0kb upstream 2955 true Tp57577_TGAC_v2_scaf_184: 355014-357968 Trifolium pratense
Tp57577_TGAC_v2_gene32897 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_184: 355014-356013 Trifolium pratense
Tp57577_TGAC_v2_gene32897 1.0kb downstream 1.0kb downstream 2955 true Tp57577_TGAC_v2_scaf_184: 356014-358968 Trifolium pratense
Tp57577_TGAC_v2_gene32897 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_184: 357969-358968 Trifolium pratense
Tp57577_TGAC_v2_gene32897 2.0kb upstream 2.0kb upstream 3955 true Tp57577_TGAC_v2_scaf_184: 354014-357968 Trifolium pratense
Tp57577_TGAC_v2_gene32897 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_184: 354014-356013 Trifolium pratense
Tp57577_TGAC_v2_gene32897 2.0kb downstream 2.0kb downstream 3955 true Tp57577_TGAC_v2_scaf_184: 356014-359968 Trifolium pratense
Tp57577_TGAC_v2_gene32897 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_184: 357969-359968 Trifolium pratense
Tp57577_TGAC_v2_gene32897 5.0kb upstream 5.0kb upstream 6955 true Tp57577_TGAC_v2_scaf_184: 351014-357968 Trifolium pratense
Tp57577_TGAC_v2_gene32897 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_184: 351014-356013 Trifolium pratense
Tp57577_TGAC_v2_gene32897 5.0kb downstream 5.0kb downstream 6955 true Tp57577_TGAC_v2_scaf_184: 356014-362968 Trifolium pratense
Tp57577_TGAC_v2_gene32897 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_184: 357969-362968 Trifolium pratense
Tp57577_TGAC_v2_gene32897 10.0kb upstream 10.0kb upstream 11955 true Tp57577_TGAC_v2_scaf_184: 346014-357968 Trifolium pratense
Tp57577_TGAC_v2_gene32897 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_184: 346014-356013 Trifolium pratense
Tp57577_TGAC_v2_gene32897 10.0kb downstream 10.0kb downstream 11955 true Tp57577_TGAC_v2_scaf_184: 356014-367968 Trifolium pratense
Tp57577_TGAC_v2_gene32897 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_184: 357969-367968 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313544 5265 Fabidae View MSA
124073853 5270 Rosid View MSA
123752094 5271 Pentapetalae View MSA
122797549 5272 Eudicot View MSA
122050735 5273 Angiosperm View MSA
121350507 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain