Gene : Tp57577_TGAC_v2_gene32608 T. pratense v2
Defline:  (1 of 1) 2.1.1.171 - 16S rRNA (guanine(966)-N(2))-methyltransferase / M(2)G966 methyltransferase Genomic Order:  6
Name:  ? Tp57577_TGAC_v2_gene32608 Secondary Identifier:  ? PAC:35981527
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene32608 0.5kb upstream 0.5kb upstream 6410 true Tp57577_TGAC_v2_scaf_181: 38359-44768 Trifolium pratense
Tp57577_TGAC_v2_gene32608 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_181: 38359-38858 Trifolium pratense
Tp57577_TGAC_v2_gene32608 0.5kb downstream 0.5kb downstream 6410 true Tp57577_TGAC_v2_scaf_181: 38859-45268 Trifolium pratense
Tp57577_TGAC_v2_gene32608 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_181: 44769-45268 Trifolium pratense
Tp57577_TGAC_v2_gene32608 1.0kb upstream 1.0kb upstream 6910 true Tp57577_TGAC_v2_scaf_181: 37859-44768 Trifolium pratense
Tp57577_TGAC_v2_gene32608 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_181: 37859-38858 Trifolium pratense
Tp57577_TGAC_v2_gene32608 1.0kb downstream 1.0kb downstream 6910 true Tp57577_TGAC_v2_scaf_181: 38859-45768 Trifolium pratense
Tp57577_TGAC_v2_gene32608 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_181: 44769-45768 Trifolium pratense
Tp57577_TGAC_v2_gene32608 2.0kb upstream 2.0kb upstream 7910 true Tp57577_TGAC_v2_scaf_181: 36859-44768 Trifolium pratense
Tp57577_TGAC_v2_gene32608 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_181: 36859-38858 Trifolium pratense
Tp57577_TGAC_v2_gene32608 2.0kb downstream 2.0kb downstream 7910 true Tp57577_TGAC_v2_scaf_181: 38859-46768 Trifolium pratense
Tp57577_TGAC_v2_gene32608 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_181: 44769-46768 Trifolium pratense
Tp57577_TGAC_v2_gene32608 5.0kb upstream 5.0kb upstream 10910 true Tp57577_TGAC_v2_scaf_181: 33859-44768 Trifolium pratense
Tp57577_TGAC_v2_gene32608 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_181: 33859-38858 Trifolium pratense
Tp57577_TGAC_v2_gene32608 5.0kb downstream 5.0kb downstream 10910 true Tp57577_TGAC_v2_scaf_181: 38859-49768 Trifolium pratense
Tp57577_TGAC_v2_gene32608 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_181: 44769-49768 Trifolium pratense
Tp57577_TGAC_v2_gene32608 10.0kb upstream 10.0kb upstream 15910 true Tp57577_TGAC_v2_scaf_181: 28859-44768 Trifolium pratense
Tp57577_TGAC_v2_gene32608 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_181: 28859-38858 Trifolium pratense
Tp57577_TGAC_v2_gene32608 10.0kb downstream 10.0kb downstream 15910 true Tp57577_TGAC_v2_scaf_181: 38859-54768 Trifolium pratense
Tp57577_TGAC_v2_gene32608 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_181: 44769-54768 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300830 5265 Fabidae View MSA
124067433 5270 Rosid View MSA
123738350 5271 Pentapetalae View MSA
122790005 5272 Eudicot View MSA
122044279 5273 Angiosperm View MSA
121347600 5274 Embryophyte View MSA
123423855 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain