Gene : Tp57577_TGAC_v2_gene37089 T. pratense v2
Defline:  (1 of 6) PF09133 - SANTA (SANT Associated) (SANTA) Genomic Order:  2985
Name:  ? Tp57577_TGAC_v2_gene37089 Secondary Identifier:  ? PAC:35972673
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene37089 0.5kb upstream 0.5kb upstream 5182 true Tp57577_TGAC_v2_LG2: 27092546-27097727 Trifolium pratense
Tp57577_TGAC_v2_gene37089 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 27097228-27097727 Trifolium pratense
Tp57577_TGAC_v2_gene37089 0.5kb downstream 0.5kb downstream 5182 true Tp57577_TGAC_v2_LG2: 27092046-27097227 Trifolium pratense
Tp57577_TGAC_v2_gene37089 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 27092046-27092545 Trifolium pratense
Tp57577_TGAC_v2_gene37089 1.0kb upstream 1.0kb upstream 5682 true Tp57577_TGAC_v2_LG2: 27092546-27098227 Trifolium pratense
Tp57577_TGAC_v2_gene37089 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 27097228-27098227 Trifolium pratense
Tp57577_TGAC_v2_gene37089 1.0kb downstream 1.0kb downstream 5682 true Tp57577_TGAC_v2_LG2: 27091546-27097227 Trifolium pratense
Tp57577_TGAC_v2_gene37089 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 27091546-27092545 Trifolium pratense
Tp57577_TGAC_v2_gene37089 2.0kb upstream 2.0kb upstream 6682 true Tp57577_TGAC_v2_LG2: 27092546-27099227 Trifolium pratense
Tp57577_TGAC_v2_gene37089 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 27097228-27099227 Trifolium pratense
Tp57577_TGAC_v2_gene37089 2.0kb downstream 2.0kb downstream 6682 true Tp57577_TGAC_v2_LG2: 27090546-27097227 Trifolium pratense
Tp57577_TGAC_v2_gene37089 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 27090546-27092545 Trifolium pratense
Tp57577_TGAC_v2_gene37089 5.0kb upstream 5.0kb upstream 9682 true Tp57577_TGAC_v2_LG2: 27092546-27102227 Trifolium pratense
Tp57577_TGAC_v2_gene37089 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 27097228-27102227 Trifolium pratense
Tp57577_TGAC_v2_gene37089 5.0kb downstream 5.0kb downstream 9682 true Tp57577_TGAC_v2_LG2: 27087546-27097227 Trifolium pratense
Tp57577_TGAC_v2_gene37089 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 27087546-27092545 Trifolium pratense
Tp57577_TGAC_v2_gene37089 10.0kb upstream 10.0kb upstream 14682 true Tp57577_TGAC_v2_LG2: 27092546-27107227 Trifolium pratense
Tp57577_TGAC_v2_gene37089 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 27097228-27107227 Trifolium pratense
Tp57577_TGAC_v2_gene37089 10.0kb downstream 10.0kb downstream 14682 true Tp57577_TGAC_v2_LG2: 27082546-27097227 Trifolium pratense
Tp57577_TGAC_v2_gene37089 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 27082546-27092545 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122295912 5265 Fabidae View MSA
124072489 5270 Rosid View MSA
123750067 5271 Pentapetalae View MSA
122795958 5272 Eudicot View MSA
122043476 5273 Angiosperm View MSA
121351771 5274 Embryophyte View MSA
123382314 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain