Gene : Tp57577_TGAC_v2_gene37066 T. pratense v2
Defline:  (1 of 1) K00605 - aminomethyltransferase (gcvT, AMT) Genomic Order:  2919
Name:  ? Tp57577_TGAC_v2_gene37066 Secondary Identifier:  ? PAC:35972155
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense GLYCLEAV-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene37066 0.5kb upstream 0.5kb upstream 3583 true Tp57577_TGAC_v2_LG2: 26635274-26638856 Trifolium pratense
Tp57577_TGAC_v2_gene37066 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 26638357-26638856 Trifolium pratense
Tp57577_TGAC_v2_gene37066 0.5kb downstream 0.5kb downstream 3583 true Tp57577_TGAC_v2_LG2: 26634774-26638356 Trifolium pratense
Tp57577_TGAC_v2_gene37066 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 26634774-26635273 Trifolium pratense
Tp57577_TGAC_v2_gene37066 1.0kb upstream 1.0kb upstream 4083 true Tp57577_TGAC_v2_LG2: 26635274-26639356 Trifolium pratense
Tp57577_TGAC_v2_gene37066 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 26638357-26639356 Trifolium pratense
Tp57577_TGAC_v2_gene37066 1.0kb downstream 1.0kb downstream 4083 true Tp57577_TGAC_v2_LG2: 26634274-26638356 Trifolium pratense
Tp57577_TGAC_v2_gene37066 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 26634274-26635273 Trifolium pratense
Tp57577_TGAC_v2_gene37066 2.0kb upstream 2.0kb upstream 5083 true Tp57577_TGAC_v2_LG2: 26635274-26640356 Trifolium pratense
Tp57577_TGAC_v2_gene37066 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 26638357-26640356 Trifolium pratense
Tp57577_TGAC_v2_gene37066 2.0kb downstream 2.0kb downstream 5083 true Tp57577_TGAC_v2_LG2: 26633274-26638356 Trifolium pratense
Tp57577_TGAC_v2_gene37066 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 26633274-26635273 Trifolium pratense
Tp57577_TGAC_v2_gene37066 5.0kb upstream 5.0kb upstream 8083 true Tp57577_TGAC_v2_LG2: 26635274-26643356 Trifolium pratense
Tp57577_TGAC_v2_gene37066 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 26638357-26643356 Trifolium pratense
Tp57577_TGAC_v2_gene37066 5.0kb downstream 5.0kb downstream 8083 true Tp57577_TGAC_v2_LG2: 26630274-26638356 Trifolium pratense
Tp57577_TGAC_v2_gene37066 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 26630274-26635273 Trifolium pratense
Tp57577_TGAC_v2_gene37066 10.0kb upstream 10.0kb upstream 13083 true Tp57577_TGAC_v2_LG2: 26635274-26648356 Trifolium pratense
Tp57577_TGAC_v2_gene37066 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 26638357-26648356 Trifolium pratense
Tp57577_TGAC_v2_gene37066 10.0kb downstream 10.0kb downstream 13083 true Tp57577_TGAC_v2_LG2: 26625274-26638356 Trifolium pratense
Tp57577_TGAC_v2_gene37066 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 26625274-26635273 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304206 5265 Fabidae View MSA
124063348 5270 Rosid View MSA
123743205 5271 Pentapetalae View MSA
122791059 5272 Eudicot View MSA
122045036 5273 Angiosperm View MSA
121345728 5274 Embryophyte View MSA
123424844 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain