Gene : Tp57577_TGAC_v2_gene420 T. pratense v2

Defline:  (1 of 11) PTHR31896:SF12 - ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN-RELATED Genomic Order:  3
Name:  ? Tp57577_TGAC_v2_gene420 Secondary Identifier:  ? PAC:35960902

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene420 0.5kb upstream 0.5kb upstream 2015 true Tp57577_TGAC_v2_scaf_1813: 7466-9480 Trifolium pratense
Tp57577_TGAC_v2_gene420 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_1813: 7466-7965 Trifolium pratense
Tp57577_TGAC_v2_gene420 0.5kb downstream 0.5kb downstream 2015 true Tp57577_TGAC_v2_scaf_1813: 7966-9980 Trifolium pratense
Tp57577_TGAC_v2_gene420 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_1813: 9481-9980 Trifolium pratense
Tp57577_TGAC_v2_gene420 1.0kb upstream 1.0kb upstream 2515 true Tp57577_TGAC_v2_scaf_1813: 6966-9480 Trifolium pratense
Tp57577_TGAC_v2_gene420 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_1813: 6966-7965 Trifolium pratense
Tp57577_TGAC_v2_gene420 1.0kb downstream 1.0kb downstream 2515 true Tp57577_TGAC_v2_scaf_1813: 7966-10480 Trifolium pratense
Tp57577_TGAC_v2_gene420 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_1813: 9481-10480 Trifolium pratense
Tp57577_TGAC_v2_gene420 2.0kb upstream 2.0kb upstream 3515 true Tp57577_TGAC_v2_scaf_1813: 5966-9480 Trifolium pratense
Tp57577_TGAC_v2_gene420 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_1813: 5966-7965 Trifolium pratense
Tp57577_TGAC_v2_gene420 2.0kb downstream 2.0kb downstream 3515 true Tp57577_TGAC_v2_scaf_1813: 7966-11480 Trifolium pratense
Tp57577_TGAC_v2_gene420 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_1813: 9481-11480 Trifolium pratense
Tp57577_TGAC_v2_gene420 5.0kb upstream 5.0kb upstream 6515 true Tp57577_TGAC_v2_scaf_1813: 2966-9480 Trifolium pratense
Tp57577_TGAC_v2_gene420 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_1813: 2966-7965 Trifolium pratense
Tp57577_TGAC_v2_gene420 5.0kb downstream 5.0kb downstream 3943 true Tp57577_TGAC_v2_scaf_1813: 7966-11908 Trifolium pratense
Tp57577_TGAC_v2_gene420 5.0kb downstream 5.0kb downstream 2428 false Tp57577_TGAC_v2_scaf_1813: 9481-11908 Trifolium pratense
Tp57577_TGAC_v2_gene420 10.0kb upstream 10.0kb upstream 9480 true Tp57577_TGAC_v2_scaf_1813: 1-9480 Trifolium pratense
Tp57577_TGAC_v2_gene420 10.0kb upstream 10.0kb upstream 7965 false Tp57577_TGAC_v2_scaf_1813: 1-7965 Trifolium pratense
Tp57577_TGAC_v2_gene420 10.0kb downstream 10.0kb downstream 3943 true Tp57577_TGAC_v2_scaf_1813: 7966-11908 Trifolium pratense
Tp57577_TGAC_v2_gene420 10.0kb downstream 10.0kb downstream 2428 false Tp57577_TGAC_v2_scaf_1813: 9481-11908 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122289954 5265 Fabidae View MSA
124061050 5270 Rosid View MSA
123747860 5271 Pentapetalae View MSA
122791254 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain