Gene : Tp57577_TGAC_v2_gene13050 T. pratense v2

Defline:  (1 of 1) PTHR12276:SF7 - CLATHRIN INTERACTOR EPSIN 1 Genomic Order:  2038
Name:  ? Tp57577_TGAC_v2_gene13050 Secondary Identifier:  ? PAC:35978510

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene13050 0.5kb upstream 0.5kb upstream 7169 true Tp57577_TGAC_v2_LG1: 17154101-17161269 Trifolium pratense
Tp57577_TGAC_v2_gene13050 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 17160770-17161269 Trifolium pratense
Tp57577_TGAC_v2_gene13050 0.5kb downstream 0.5kb downstream 7169 true Tp57577_TGAC_v2_LG1: 17153601-17160769 Trifolium pratense
Tp57577_TGAC_v2_gene13050 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 17153601-17154100 Trifolium pratense
Tp57577_TGAC_v2_gene13050 1.0kb upstream 1.0kb upstream 7669 true Tp57577_TGAC_v2_LG1: 17154101-17161769 Trifolium pratense
Tp57577_TGAC_v2_gene13050 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 17160770-17161769 Trifolium pratense
Tp57577_TGAC_v2_gene13050 1.0kb downstream 1.0kb downstream 7669 true Tp57577_TGAC_v2_LG1: 17153101-17160769 Trifolium pratense
Tp57577_TGAC_v2_gene13050 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 17153101-17154100 Trifolium pratense
Tp57577_TGAC_v2_gene13050 2.0kb upstream 2.0kb upstream 8669 true Tp57577_TGAC_v2_LG1: 17154101-17162769 Trifolium pratense
Tp57577_TGAC_v2_gene13050 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 17160770-17162769 Trifolium pratense
Tp57577_TGAC_v2_gene13050 2.0kb downstream 2.0kb downstream 8669 true Tp57577_TGAC_v2_LG1: 17152101-17160769 Trifolium pratense
Tp57577_TGAC_v2_gene13050 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 17152101-17154100 Trifolium pratense
Tp57577_TGAC_v2_gene13050 5.0kb upstream 5.0kb upstream 11669 true Tp57577_TGAC_v2_LG1: 17154101-17165769 Trifolium pratense
Tp57577_TGAC_v2_gene13050 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 17160770-17165769 Trifolium pratense
Tp57577_TGAC_v2_gene13050 5.0kb downstream 5.0kb downstream 11669 true Tp57577_TGAC_v2_LG1: 17149101-17160769 Trifolium pratense
Tp57577_TGAC_v2_gene13050 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 17149101-17154100 Trifolium pratense
Tp57577_TGAC_v2_gene13050 10.0kb upstream 10.0kb upstream 16669 true Tp57577_TGAC_v2_LG1: 17154101-17170769 Trifolium pratense
Tp57577_TGAC_v2_gene13050 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 17160770-17170769 Trifolium pratense
Tp57577_TGAC_v2_gene13050 10.0kb downstream 10.0kb downstream 16669 true Tp57577_TGAC_v2_LG1: 17144101-17160769 Trifolium pratense
Tp57577_TGAC_v2_gene13050 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 17144101-17154100 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303278 5265 Fabidae View MSA
124066182 5270 Rosid View MSA
123744434 5271 Pentapetalae View MSA
122786482 5272 Eudicot View MSA
122049187 5273 Angiosperm View MSA
121349061 5274 Embryophyte View MSA
123428144 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain