Gene : Tp57577_TGAC_v2_gene12130 T. pratense v2
Defline:  (1 of 22) PF00069//PF08263 - Protein kinase domain (Pkinase) // Leucine rich repeat N-terminal domain (LRRNT_2) Genomic Order:  2668
Name:  ? Tp57577_TGAC_v2_gene12130 Secondary Identifier:  ? PAC:35978868
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene12130 0.5kb upstream 0.5kb upstream 3585 true Tp57577_TGAC_v2_LG1: 22466201-22469785 Trifolium pratense
Tp57577_TGAC_v2_gene12130 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 22466201-22466700 Trifolium pratense
Tp57577_TGAC_v2_gene12130 0.5kb downstream 0.5kb downstream 3585 true Tp57577_TGAC_v2_LG1: 22466701-22470285 Trifolium pratense
Tp57577_TGAC_v2_gene12130 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 22469786-22470285 Trifolium pratense
Tp57577_TGAC_v2_gene12130 1.0kb upstream 1.0kb upstream 4085 true Tp57577_TGAC_v2_LG1: 22465701-22469785 Trifolium pratense
Tp57577_TGAC_v2_gene12130 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 22465701-22466700 Trifolium pratense
Tp57577_TGAC_v2_gene12130 1.0kb downstream 1.0kb downstream 4085 true Tp57577_TGAC_v2_LG1: 22466701-22470785 Trifolium pratense
Tp57577_TGAC_v2_gene12130 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 22469786-22470785 Trifolium pratense
Tp57577_TGAC_v2_gene12130 2.0kb upstream 2.0kb upstream 5085 true Tp57577_TGAC_v2_LG1: 22464701-22469785 Trifolium pratense
Tp57577_TGAC_v2_gene12130 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 22464701-22466700 Trifolium pratense
Tp57577_TGAC_v2_gene12130 2.0kb downstream 2.0kb downstream 5085 true Tp57577_TGAC_v2_LG1: 22466701-22471785 Trifolium pratense
Tp57577_TGAC_v2_gene12130 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 22469786-22471785 Trifolium pratense
Tp57577_TGAC_v2_gene12130 5.0kb upstream 5.0kb upstream 8085 true Tp57577_TGAC_v2_LG1: 22461701-22469785 Trifolium pratense
Tp57577_TGAC_v2_gene12130 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 22461701-22466700 Trifolium pratense
Tp57577_TGAC_v2_gene12130 5.0kb downstream 5.0kb downstream 8085 true Tp57577_TGAC_v2_LG1: 22466701-22474785 Trifolium pratense
Tp57577_TGAC_v2_gene12130 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 22469786-22474785 Trifolium pratense
Tp57577_TGAC_v2_gene12130 10.0kb upstream 10.0kb upstream 13085 true Tp57577_TGAC_v2_LG1: 22456701-22469785 Trifolium pratense
Tp57577_TGAC_v2_gene12130 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 22456701-22466700 Trifolium pratense
Tp57577_TGAC_v2_gene12130 10.0kb downstream 10.0kb downstream 13085 true Tp57577_TGAC_v2_LG1: 22466701-22479785 Trifolium pratense
Tp57577_TGAC_v2_gene12130 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 22469786-22479785 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314702 5265 Fabidae View MSA
124074219 5270 Rosid View MSA
123750031 5271 Pentapetalae View MSA
122795322 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain