Gene : Tp57577_TGAC_v2_gene7028 T. pratense v2
Defline:  (1 of 1) K01583 - arginine decarboxylase (E4.1.1.19) Genomic Order:  1
Name:  ? Tp57577_TGAC_v2_gene7028 Secondary Identifier:  ? PAC:35967380
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense POLYAMINSYN3-PWY Trifolium pratense pathologic  
Tpratense PWY-43 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene7028 0.5kb upstream 0.5kb upstream 2775 true Tp57577_TGAC_v2_scaf_1988: 4566-7340 Trifolium pratense
Tp57577_TGAC_v2_gene7028 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_1988: 4566-5065 Trifolium pratense
Tp57577_TGAC_v2_gene7028 0.5kb downstream 0.5kb downstream 2775 true Tp57577_TGAC_v2_scaf_1988: 5066-7840 Trifolium pratense
Tp57577_TGAC_v2_gene7028 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_1988: 7341-7840 Trifolium pratense
Tp57577_TGAC_v2_gene7028 1.0kb upstream 1.0kb upstream 3275 true Tp57577_TGAC_v2_scaf_1988: 4066-7340 Trifolium pratense
Tp57577_TGAC_v2_gene7028 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_1988: 4066-5065 Trifolium pratense
Tp57577_TGAC_v2_gene7028 1.0kb downstream 1.0kb downstream 3275 true Tp57577_TGAC_v2_scaf_1988: 5066-8340 Trifolium pratense
Tp57577_TGAC_v2_gene7028 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_1988: 7341-8340 Trifolium pratense
Tp57577_TGAC_v2_gene7028 2.0kb upstream 2.0kb upstream 4275 true Tp57577_TGAC_v2_scaf_1988: 3066-7340 Trifolium pratense
Tp57577_TGAC_v2_gene7028 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_1988: 3066-5065 Trifolium pratense
Tp57577_TGAC_v2_gene7028 2.0kb downstream 2.0kb downstream 4266 true Tp57577_TGAC_v2_scaf_1988: 5066-9331 Trifolium pratense
Tp57577_TGAC_v2_gene7028 2.0kb downstream 2.0kb downstream 1991 false Tp57577_TGAC_v2_scaf_1988: 7341-9331 Trifolium pratense
Tp57577_TGAC_v2_gene7028 5.0kb upstream 5.0kb upstream 7275 true Tp57577_TGAC_v2_scaf_1988: 66-7340 Trifolium pratense
Tp57577_TGAC_v2_gene7028 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_1988: 66-5065 Trifolium pratense
Tp57577_TGAC_v2_gene7028 5.0kb downstream 5.0kb downstream 4266 true Tp57577_TGAC_v2_scaf_1988: 5066-9331 Trifolium pratense
Tp57577_TGAC_v2_gene7028 5.0kb downstream 5.0kb downstream 1991 false Tp57577_TGAC_v2_scaf_1988: 7341-9331 Trifolium pratense
Tp57577_TGAC_v2_gene7028 10.0kb upstream 10.0kb upstream 7340 true Tp57577_TGAC_v2_scaf_1988: 1-7340 Trifolium pratense
Tp57577_TGAC_v2_gene7028 10.0kb upstream 10.0kb upstream 5065 false Tp57577_TGAC_v2_scaf_1988: 1-5065 Trifolium pratense
Tp57577_TGAC_v2_gene7028 10.0kb downstream 10.0kb downstream 4266 true Tp57577_TGAC_v2_scaf_1988: 5066-9331 Trifolium pratense
Tp57577_TGAC_v2_gene7028 10.0kb downstream 10.0kb downstream 1991 false Tp57577_TGAC_v2_scaf_1988: 7341-9331 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305392 5265 Fabidae View MSA
124064588 5270 Rosid View MSA
123739718 5271 Pentapetalae View MSA
122791004 5272 Eudicot View MSA
122046464 5273 Angiosperm View MSA
121350786 5274 Embryophyte View MSA
123424715 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain