Gene : Tp57577_TGAC_v2_gene10229 T. pratense v2
Defline:  (1 of 1) PF01276//PF03711 - Orn/Lys/Arg decarboxylase, major domain (OKR_DC_1) // Orn/Lys/Arg decarboxylase, C-terminal domain (OKR_DC_1_C) Genomic Order:  19
Name:  ? Tp57577_TGAC_v2_gene10229 Secondary Identifier:  ? PAC:35968762
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense POLYAMINSYN3-PWY Trifolium pratense pathologic  
Tpratense PWY-43 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene10229 0.5kb upstream 0.5kb upstream 3764 true Tp57577_TGAC_v2_scaf_563: 148132-151895 Trifolium pratense
Tp57577_TGAC_v2_gene10229 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_563: 151396-151895 Trifolium pratense
Tp57577_TGAC_v2_gene10229 0.5kb downstream 0.5kb downstream 3764 true Tp57577_TGAC_v2_scaf_563: 147632-151395 Trifolium pratense
Tp57577_TGAC_v2_gene10229 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_563: 147632-148131 Trifolium pratense
Tp57577_TGAC_v2_gene10229 1.0kb upstream 1.0kb upstream 4264 true Tp57577_TGAC_v2_scaf_563: 148132-152395 Trifolium pratense
Tp57577_TGAC_v2_gene10229 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_563: 151396-152395 Trifolium pratense
Tp57577_TGAC_v2_gene10229 1.0kb downstream 1.0kb downstream 4264 true Tp57577_TGAC_v2_scaf_563: 147132-151395 Trifolium pratense
Tp57577_TGAC_v2_gene10229 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_563: 147132-148131 Trifolium pratense
Tp57577_TGAC_v2_gene10229 2.0kb upstream 2.0kb upstream 5264 true Tp57577_TGAC_v2_scaf_563: 148132-153395 Trifolium pratense
Tp57577_TGAC_v2_gene10229 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_563: 151396-153395 Trifolium pratense
Tp57577_TGAC_v2_gene10229 2.0kb downstream 2.0kb downstream 5264 true Tp57577_TGAC_v2_scaf_563: 146132-151395 Trifolium pratense
Tp57577_TGAC_v2_gene10229 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_563: 146132-148131 Trifolium pratense
Tp57577_TGAC_v2_gene10229 5.0kb upstream 5.0kb upstream 8264 true Tp57577_TGAC_v2_scaf_563: 148132-156395 Trifolium pratense
Tp57577_TGAC_v2_gene10229 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_563: 151396-156395 Trifolium pratense
Tp57577_TGAC_v2_gene10229 5.0kb downstream 5.0kb downstream 8264 true Tp57577_TGAC_v2_scaf_563: 143132-151395 Trifolium pratense
Tp57577_TGAC_v2_gene10229 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_563: 143132-148131 Trifolium pratense
Tp57577_TGAC_v2_gene10229 10.0kb upstream 10.0kb upstream 10152 true Tp57577_TGAC_v2_scaf_563: 148132-158283 Trifolium pratense
Tp57577_TGAC_v2_gene10229 10.0kb upstream 10.0kb upstream 6888 false Tp57577_TGAC_v2_scaf_563: 151396-158283 Trifolium pratense
Tp57577_TGAC_v2_gene10229 10.0kb downstream 10.0kb downstream 13264 true Tp57577_TGAC_v2_scaf_563: 138132-151395 Trifolium pratense
Tp57577_TGAC_v2_gene10229 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_563: 138132-148131 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122289784 5265 Fabidae View MSA
124029725 5270 Rosid View MSA
123603377 5271 Pentapetalae View MSA
122796978 5272 Eudicot View MSA
122048497 5273 Angiosperm View MSA
121348486 5274 Embryophyte View MSA
123425712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain