Gene : Tp57577_TGAC_v2_gene10228 T. pratense v2
Defline:  (1 of 1) K08873 - PI-3-kinase-related kinase SMG-1 (SMG1) Genomic Order:  7
Name:  ? Tp57577_TGAC_v2_gene10228 Secondary Identifier:  ? PAC:35968769
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene10228 0.5kb upstream 0.5kb upstream 18435 true Tp57577_TGAC_v2_scaf_563: 79351-97785 Trifolium pratense
Tp57577_TGAC_v2_gene10228 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_563: 97286-97785 Trifolium pratense
Tp57577_TGAC_v2_gene10228 0.5kb downstream 0.5kb downstream 18435 true Tp57577_TGAC_v2_scaf_563: 78851-97285 Trifolium pratense
Tp57577_TGAC_v2_gene10228 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_563: 78851-79350 Trifolium pratense
Tp57577_TGAC_v2_gene10228 1.0kb upstream 1.0kb upstream 18935 true Tp57577_TGAC_v2_scaf_563: 79351-98285 Trifolium pratense
Tp57577_TGAC_v2_gene10228 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_563: 97286-98285 Trifolium pratense
Tp57577_TGAC_v2_gene10228 1.0kb downstream 1.0kb downstream 18935 true Tp57577_TGAC_v2_scaf_563: 78351-97285 Trifolium pratense
Tp57577_TGAC_v2_gene10228 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_563: 78351-79350 Trifolium pratense
Tp57577_TGAC_v2_gene10228 2.0kb upstream 2.0kb upstream 19935 true Tp57577_TGAC_v2_scaf_563: 79351-99285 Trifolium pratense
Tp57577_TGAC_v2_gene10228 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_563: 97286-99285 Trifolium pratense
Tp57577_TGAC_v2_gene10228 2.0kb downstream 2.0kb downstream 19935 true Tp57577_TGAC_v2_scaf_563: 77351-97285 Trifolium pratense
Tp57577_TGAC_v2_gene10228 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_563: 77351-79350 Trifolium pratense
Tp57577_TGAC_v2_gene10228 5.0kb upstream 5.0kb upstream 22935 true Tp57577_TGAC_v2_scaf_563: 79351-102285 Trifolium pratense
Tp57577_TGAC_v2_gene10228 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_563: 97286-102285 Trifolium pratense
Tp57577_TGAC_v2_gene10228 5.0kb downstream 5.0kb downstream 22935 true Tp57577_TGAC_v2_scaf_563: 74351-97285 Trifolium pratense
Tp57577_TGAC_v2_gene10228 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_563: 74351-79350 Trifolium pratense
Tp57577_TGAC_v2_gene10228 10.0kb upstream 10.0kb upstream 27935 true Tp57577_TGAC_v2_scaf_563: 79351-107285 Trifolium pratense
Tp57577_TGAC_v2_gene10228 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_563: 97286-107285 Trifolium pratense
Tp57577_TGAC_v2_gene10228 10.0kb downstream 10.0kb downstream 27935 true Tp57577_TGAC_v2_scaf_563: 69351-97285 Trifolium pratense
Tp57577_TGAC_v2_gene10228 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_563: 69351-79350 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300926 5265 Fabidae View MSA
124050345 5270 Rosid View MSA
123740194 5271 Pentapetalae View MSA
122789167 5272 Eudicot View MSA
122046807 5273 Angiosperm View MSA
121348670 5274 Embryophyte View MSA
123425696 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain