Gene : Tp57577_TGAC_v2_gene13301 T. pratense v2

Defline:  (1 of 2) KOG1893 - Uncharacterized conserved protein Genomic Order:  2219
Name:  ? Tp57577_TGAC_v2_gene13301 Secondary Identifier:  ? PAC:35978197

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene13301 0.5kb upstream 0.5kb upstream 24228 true Tp57577_TGAC_v2_LG1: 18755043-18779270 Trifolium pratense
Tp57577_TGAC_v2_gene13301 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 18778771-18779270 Trifolium pratense
Tp57577_TGAC_v2_gene13301 0.5kb downstream 0.5kb downstream 24228 true Tp57577_TGAC_v2_LG1: 18754543-18778770 Trifolium pratense
Tp57577_TGAC_v2_gene13301 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 18754543-18755042 Trifolium pratense
Tp57577_TGAC_v2_gene13301 1.0kb upstream 1.0kb upstream 24728 true Tp57577_TGAC_v2_LG1: 18755043-18779770 Trifolium pratense
Tp57577_TGAC_v2_gene13301 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 18778771-18779770 Trifolium pratense
Tp57577_TGAC_v2_gene13301 1.0kb downstream 1.0kb downstream 24728 true Tp57577_TGAC_v2_LG1: 18754043-18778770 Trifolium pratense
Tp57577_TGAC_v2_gene13301 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 18754043-18755042 Trifolium pratense
Tp57577_TGAC_v2_gene13301 2.0kb upstream 2.0kb upstream 25728 true Tp57577_TGAC_v2_LG1: 18755043-18780770 Trifolium pratense
Tp57577_TGAC_v2_gene13301 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 18778771-18780770 Trifolium pratense
Tp57577_TGAC_v2_gene13301 2.0kb downstream 2.0kb downstream 25728 true Tp57577_TGAC_v2_LG1: 18753043-18778770 Trifolium pratense
Tp57577_TGAC_v2_gene13301 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 18753043-18755042 Trifolium pratense
Tp57577_TGAC_v2_gene13301 5.0kb upstream 5.0kb upstream 28728 true Tp57577_TGAC_v2_LG1: 18755043-18783770 Trifolium pratense
Tp57577_TGAC_v2_gene13301 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 18778771-18783770 Trifolium pratense
Tp57577_TGAC_v2_gene13301 5.0kb downstream 5.0kb downstream 28728 true Tp57577_TGAC_v2_LG1: 18750043-18778770 Trifolium pratense
Tp57577_TGAC_v2_gene13301 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 18750043-18755042 Trifolium pratense
Tp57577_TGAC_v2_gene13301 10.0kb upstream 10.0kb upstream 33728 true Tp57577_TGAC_v2_LG1: 18755043-18788770 Trifolium pratense
Tp57577_TGAC_v2_gene13301 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 18778771-18788770 Trifolium pratense
Tp57577_TGAC_v2_gene13301 10.0kb downstream 10.0kb downstream 33728 true Tp57577_TGAC_v2_LG1: 18745043-18778770 Trifolium pratense
Tp57577_TGAC_v2_gene13301 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 18745043-18755042 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041327 5273 Angiosperm View MSA
122306795 5265 Fabidae View MSA
124072084 5270 Rosid View MSA
123743818 5271 Pentapetalae View MSA
122790610 5272 Eudicot View MSA
121350793 5274 Embryophyte View MSA
123427500 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain