Gene : Tp57577_TGAC_v2_gene13099 T. pratense v2
Defline:  (1 of 1) PTHR11850:SF92 - HOMEOBOX PROTEIN ATH1 Genomic Order:  2022
Name:  ? Tp57577_TGAC_v2_gene13099 Secondary Identifier:  ? PAC:35981263
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene13099 0.5kb upstream 0.5kb upstream 4384 true Tp57577_TGAC_v2_LG1: 16979846-16984229 Trifolium pratense
Tp57577_TGAC_v2_gene13099 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 16979846-16980345 Trifolium pratense
Tp57577_TGAC_v2_gene13099 0.5kb downstream 0.5kb downstream 4384 true Tp57577_TGAC_v2_LG1: 16980346-16984729 Trifolium pratense
Tp57577_TGAC_v2_gene13099 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 16984230-16984729 Trifolium pratense
Tp57577_TGAC_v2_gene13099 1.0kb upstream 1.0kb upstream 4884 true Tp57577_TGAC_v2_LG1: 16979346-16984229 Trifolium pratense
Tp57577_TGAC_v2_gene13099 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 16979346-16980345 Trifolium pratense
Tp57577_TGAC_v2_gene13099 1.0kb downstream 1.0kb downstream 4884 true Tp57577_TGAC_v2_LG1: 16980346-16985229 Trifolium pratense
Tp57577_TGAC_v2_gene13099 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 16984230-16985229 Trifolium pratense
Tp57577_TGAC_v2_gene13099 2.0kb upstream 2.0kb upstream 5884 true Tp57577_TGAC_v2_LG1: 16978346-16984229 Trifolium pratense
Tp57577_TGAC_v2_gene13099 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 16978346-16980345 Trifolium pratense
Tp57577_TGAC_v2_gene13099 2.0kb downstream 2.0kb downstream 5884 true Tp57577_TGAC_v2_LG1: 16980346-16986229 Trifolium pratense
Tp57577_TGAC_v2_gene13099 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 16984230-16986229 Trifolium pratense
Tp57577_TGAC_v2_gene13099 5.0kb upstream 5.0kb upstream 8884 true Tp57577_TGAC_v2_LG1: 16975346-16984229 Trifolium pratense
Tp57577_TGAC_v2_gene13099 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 16975346-16980345 Trifolium pratense
Tp57577_TGAC_v2_gene13099 5.0kb downstream 5.0kb downstream 8884 true Tp57577_TGAC_v2_LG1: 16980346-16989229 Trifolium pratense
Tp57577_TGAC_v2_gene13099 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 16984230-16989229 Trifolium pratense
Tp57577_TGAC_v2_gene13099 10.0kb upstream 10.0kb upstream 13884 true Tp57577_TGAC_v2_LG1: 16970346-16984229 Trifolium pratense
Tp57577_TGAC_v2_gene13099 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 16970346-16980345 Trifolium pratense
Tp57577_TGAC_v2_gene13099 10.0kb downstream 10.0kb downstream 13884 true Tp57577_TGAC_v2_LG1: 16980346-16994229 Trifolium pratense
Tp57577_TGAC_v2_gene13099 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 16984230-16994229 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026468 5273 Angiosperm View MSA
122311728 5265 Fabidae View MSA
124067667 5270 Rosid View MSA
123747040 5271 Pentapetalae View MSA
122793923 5272 Eudicot View MSA
121296345 5274 Embryophyte View MSA
123334524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain