Gene : Tp57577_TGAC_v2_gene13130 T. pratense v2

Defline:  (1 of 2) PTHR10641:SF519 - TRANSCRIPTION FACTOR RAX2 Genomic Order:  2044
Name:  ? Tp57577_TGAC_v2_gene13130 Secondary Identifier:  ? PAC:35978496

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene13130 0.5kb upstream 0.5kb upstream 7164 true Tp57577_TGAC_v2_LG1: 17231150-17238313 Trifolium pratense
Tp57577_TGAC_v2_gene13130 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 17231150-17231649 Trifolium pratense
Tp57577_TGAC_v2_gene13130 0.5kb downstream 0.5kb downstream 7164 true Tp57577_TGAC_v2_LG1: 17231650-17238813 Trifolium pratense
Tp57577_TGAC_v2_gene13130 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 17238314-17238813 Trifolium pratense
Tp57577_TGAC_v2_gene13130 1.0kb upstream 1.0kb upstream 7664 true Tp57577_TGAC_v2_LG1: 17230650-17238313 Trifolium pratense
Tp57577_TGAC_v2_gene13130 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 17230650-17231649 Trifolium pratense
Tp57577_TGAC_v2_gene13130 1.0kb downstream 1.0kb downstream 7664 true Tp57577_TGAC_v2_LG1: 17231650-17239313 Trifolium pratense
Tp57577_TGAC_v2_gene13130 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 17238314-17239313 Trifolium pratense
Tp57577_TGAC_v2_gene13130 2.0kb upstream 2.0kb upstream 8664 true Tp57577_TGAC_v2_LG1: 17229650-17238313 Trifolium pratense
Tp57577_TGAC_v2_gene13130 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 17229650-17231649 Trifolium pratense
Tp57577_TGAC_v2_gene13130 2.0kb downstream 2.0kb downstream 8664 true Tp57577_TGAC_v2_LG1: 17231650-17240313 Trifolium pratense
Tp57577_TGAC_v2_gene13130 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 17238314-17240313 Trifolium pratense
Tp57577_TGAC_v2_gene13130 5.0kb upstream 5.0kb upstream 11664 true Tp57577_TGAC_v2_LG1: 17226650-17238313 Trifolium pratense
Tp57577_TGAC_v2_gene13130 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 17226650-17231649 Trifolium pratense
Tp57577_TGAC_v2_gene13130 5.0kb downstream 5.0kb downstream 11664 true Tp57577_TGAC_v2_LG1: 17231650-17243313 Trifolium pratense
Tp57577_TGAC_v2_gene13130 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 17238314-17243313 Trifolium pratense
Tp57577_TGAC_v2_gene13130 10.0kb upstream 10.0kb upstream 16664 true Tp57577_TGAC_v2_LG1: 17221650-17238313 Trifolium pratense
Tp57577_TGAC_v2_gene13130 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 17221650-17231649 Trifolium pratense
Tp57577_TGAC_v2_gene13130 10.0kb downstream 10.0kb downstream 16664 true Tp57577_TGAC_v2_LG1: 17231650-17248313 Trifolium pratense
Tp57577_TGAC_v2_gene13130 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 17238314-17248313 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311579 5265 Fabidae View MSA
124071714 5270 Rosid View MSA
123746695 5271 Pentapetalae View MSA
122790538 5272 Eudicot View MSA
122047860 5273 Angiosperm View MSA
121310809 5274 Embryophyte View MSA
123348206 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain