Gene : Tp57577_TGAC_v2_gene32751 T. pratense v2
Defline:  (1 of 2) PTHR10774:SF61 - ELONGATION DEFECTIVE 1 Genomic Order:  9
Name:  ? Tp57577_TGAC_v2_gene32751 Secondary Identifier:  ? PAC:35986113
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene32751 0.5kb upstream 0.5kb upstream 6549 true Tp57577_TGAC_v2_scaf_188: 100967-107515 Trifolium pratense
Tp57577_TGAC_v2_gene32751 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_188: 107016-107515 Trifolium pratense
Tp57577_TGAC_v2_gene32751 0.5kb downstream 0.5kb downstream 6549 true Tp57577_TGAC_v2_scaf_188: 100467-107015 Trifolium pratense
Tp57577_TGAC_v2_gene32751 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_188: 100467-100966 Trifolium pratense
Tp57577_TGAC_v2_gene32751 1.0kb upstream 1.0kb upstream 7049 true Tp57577_TGAC_v2_scaf_188: 100967-108015 Trifolium pratense
Tp57577_TGAC_v2_gene32751 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_188: 107016-108015 Trifolium pratense
Tp57577_TGAC_v2_gene32751 1.0kb downstream 1.0kb downstream 7049 true Tp57577_TGAC_v2_scaf_188: 99967-107015 Trifolium pratense
Tp57577_TGAC_v2_gene32751 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_188: 99967-100966 Trifolium pratense
Tp57577_TGAC_v2_gene32751 2.0kb upstream 2.0kb upstream 8049 true Tp57577_TGAC_v2_scaf_188: 100967-109015 Trifolium pratense
Tp57577_TGAC_v2_gene32751 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_188: 107016-109015 Trifolium pratense
Tp57577_TGAC_v2_gene32751 2.0kb downstream 2.0kb downstream 8049 true Tp57577_TGAC_v2_scaf_188: 98967-107015 Trifolium pratense
Tp57577_TGAC_v2_gene32751 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_188: 98967-100966 Trifolium pratense
Tp57577_TGAC_v2_gene32751 5.0kb upstream 5.0kb upstream 11049 true Tp57577_TGAC_v2_scaf_188: 100967-112015 Trifolium pratense
Tp57577_TGAC_v2_gene32751 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_188: 107016-112015 Trifolium pratense
Tp57577_TGAC_v2_gene32751 5.0kb downstream 5.0kb downstream 11049 true Tp57577_TGAC_v2_scaf_188: 95967-107015 Trifolium pratense
Tp57577_TGAC_v2_gene32751 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_188: 95967-100966 Trifolium pratense
Tp57577_TGAC_v2_gene32751 10.0kb upstream 10.0kb upstream 16049 true Tp57577_TGAC_v2_scaf_188: 100967-117015 Trifolium pratense
Tp57577_TGAC_v2_gene32751 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_188: 107016-117015 Trifolium pratense
Tp57577_TGAC_v2_gene32751 10.0kb downstream 10.0kb downstream 16049 true Tp57577_TGAC_v2_scaf_188: 90967-107015 Trifolium pratense
Tp57577_TGAC_v2_gene32751 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_188: 90967-100966 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307875 5265 Fabidae View MSA
124074098 5270 Rosid View MSA
123747804 5271 Pentapetalae View MSA
122791335 5272 Eudicot View MSA
122042334 5273 Angiosperm View MSA
121345597 5274 Embryophyte View MSA
123428781 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain