Gene : Tp57577_TGAC_v2_gene22995 T. pratense v2
Defline:  (1 of 44) PF13359 - DDE superfamily endonuclease (DDE_Tnp_4) Genomic Order:  1
Name:  ? Tp57577_TGAC_v2_gene22995 Secondary Identifier:  ? PAC:35959410
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene22995 0.5kb upstream 0.5kb upstream 2542 true Tp57577_TGAC_v2_scaf_941: 8764-11305 Trifolium pratense
Tp57577_TGAC_v2_gene22995 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_941: 10806-11305 Trifolium pratense
Tp57577_TGAC_v2_gene22995 0.5kb downstream 0.5kb downstream 2542 true Tp57577_TGAC_v2_scaf_941: 8264-10805 Trifolium pratense
Tp57577_TGAC_v2_gene22995 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_941: 8264-8763 Trifolium pratense
Tp57577_TGAC_v2_gene22995 1.0kb upstream 1.0kb upstream 3042 true Tp57577_TGAC_v2_scaf_941: 8764-11805 Trifolium pratense
Tp57577_TGAC_v2_gene22995 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_941: 10806-11805 Trifolium pratense
Tp57577_TGAC_v2_gene22995 1.0kb downstream 1.0kb downstream 3042 true Tp57577_TGAC_v2_scaf_941: 7764-10805 Trifolium pratense
Tp57577_TGAC_v2_gene22995 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_941: 7764-8763 Trifolium pratense
Tp57577_TGAC_v2_gene22995 2.0kb upstream 2.0kb upstream 4042 true Tp57577_TGAC_v2_scaf_941: 8764-12805 Trifolium pratense
Tp57577_TGAC_v2_gene22995 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_941: 10806-12805 Trifolium pratense
Tp57577_TGAC_v2_gene22995 2.0kb downstream 2.0kb downstream 4042 true Tp57577_TGAC_v2_scaf_941: 6764-10805 Trifolium pratense
Tp57577_TGAC_v2_gene22995 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_941: 6764-8763 Trifolium pratense
Tp57577_TGAC_v2_gene22995 5.0kb upstream 5.0kb upstream 7042 true Tp57577_TGAC_v2_scaf_941: 8764-15805 Trifolium pratense
Tp57577_TGAC_v2_gene22995 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_941: 10806-15805 Trifolium pratense
Tp57577_TGAC_v2_gene22995 5.0kb downstream 5.0kb downstream 7042 true Tp57577_TGAC_v2_scaf_941: 3764-10805 Trifolium pratense
Tp57577_TGAC_v2_gene22995 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_941: 3764-8763 Trifolium pratense
Tp57577_TGAC_v2_gene22995 10.0kb upstream 10.0kb upstream 12042 true Tp57577_TGAC_v2_scaf_941: 8764-20805 Trifolium pratense
Tp57577_TGAC_v2_gene22995 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_941: 10806-20805 Trifolium pratense
Tp57577_TGAC_v2_gene22995 10.0kb downstream 10.0kb downstream 10805 true Tp57577_TGAC_v2_scaf_941: 1-10805 Trifolium pratense
Tp57577_TGAC_v2_gene22995 10.0kb downstream 10.0kb downstream 8763 false Tp57577_TGAC_v2_scaf_941: 1-8763 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315117 5265 Fabidae View MSA
124066103 5270 Rosid View MSA
123753432 5271 Pentapetalae View MSA
122797499 5272 Eudicot View MSA
122051638 5273 Angiosperm View MSA
121312593 5274 Embryophyte View MSA
123349751 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain