Gene : Tp57577_TGAC_v2_gene8243 T. pratense v2
Defline:  (1 of 41) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  7
Name:  ? Tp57577_TGAC_v2_gene8243 Secondary Identifier:  ? PAC:35952868
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene8243 0.5kb upstream 0.5kb upstream 4085 true Tp57577_TGAC_v2_scaf_277: 95286-99370 Trifolium pratense
Tp57577_TGAC_v2_gene8243 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_277: 95286-95785 Trifolium pratense
Tp57577_TGAC_v2_gene8243 0.5kb downstream 0.5kb downstream 4085 true Tp57577_TGAC_v2_scaf_277: 95786-99870 Trifolium pratense
Tp57577_TGAC_v2_gene8243 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_277: 99371-99870 Trifolium pratense
Tp57577_TGAC_v2_gene8243 1.0kb upstream 1.0kb upstream 4585 true Tp57577_TGAC_v2_scaf_277: 94786-99370 Trifolium pratense
Tp57577_TGAC_v2_gene8243 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_277: 94786-95785 Trifolium pratense
Tp57577_TGAC_v2_gene8243 1.0kb downstream 1.0kb downstream 4585 true Tp57577_TGAC_v2_scaf_277: 95786-100370 Trifolium pratense
Tp57577_TGAC_v2_gene8243 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_277: 99371-100370 Trifolium pratense
Tp57577_TGAC_v2_gene8243 2.0kb upstream 2.0kb upstream 5585 true Tp57577_TGAC_v2_scaf_277: 93786-99370 Trifolium pratense
Tp57577_TGAC_v2_gene8243 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_277: 93786-95785 Trifolium pratense
Tp57577_TGAC_v2_gene8243 2.0kb downstream 2.0kb downstream 5585 true Tp57577_TGAC_v2_scaf_277: 95786-101370 Trifolium pratense
Tp57577_TGAC_v2_gene8243 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_277: 99371-101370 Trifolium pratense
Tp57577_TGAC_v2_gene8243 5.0kb upstream 5.0kb upstream 8585 true Tp57577_TGAC_v2_scaf_277: 90786-99370 Trifolium pratense
Tp57577_TGAC_v2_gene8243 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_277: 90786-95785 Trifolium pratense
Tp57577_TGAC_v2_gene8243 5.0kb downstream 5.0kb downstream 8585 true Tp57577_TGAC_v2_scaf_277: 95786-104370 Trifolium pratense
Tp57577_TGAC_v2_gene8243 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_277: 99371-104370 Trifolium pratense
Tp57577_TGAC_v2_gene8243 10.0kb upstream 10.0kb upstream 13585 true Tp57577_TGAC_v2_scaf_277: 85786-99370 Trifolium pratense
Tp57577_TGAC_v2_gene8243 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_277: 85786-95785 Trifolium pratense
Tp57577_TGAC_v2_gene8243 10.0kb downstream 10.0kb downstream 13585 true Tp57577_TGAC_v2_scaf_277: 95786-109370 Trifolium pratense
Tp57577_TGAC_v2_gene8243 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_277: 99371-109370 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041181 5273 Angiosperm View MSA
122308364 5265 Fabidae View MSA
124063863 5270 Rosid View MSA
123748869 5271 Pentapetalae View MSA
122792190 5272 Eudicot View MSA
121309811 5274 Embryophyte View MSA
123347464 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain