Gene : Tp57577_TGAC_v2_gene8238 T. pratense v2
Defline:  (1 of 1) PTHR20932:SF8 - PEPTIDOGLYCAN-BINDING LYSM DOMAIN-CONTAINING PROTEIN Genomic Order:  3
Name:  ? Tp57577_TGAC_v2_gene8238 Secondary Identifier:  ? PAC:35952858
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene8238 0.5kb upstream 0.5kb upstream 3550 true Tp57577_TGAC_v2_scaf_277: 30014-33563 Trifolium pratense
Tp57577_TGAC_v2_gene8238 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_277: 33064-33563 Trifolium pratense
Tp57577_TGAC_v2_gene8238 0.5kb downstream 0.5kb downstream 3550 true Tp57577_TGAC_v2_scaf_277: 29514-33063 Trifolium pratense
Tp57577_TGAC_v2_gene8238 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_277: 29514-30013 Trifolium pratense
Tp57577_TGAC_v2_gene8238 1.0kb upstream 1.0kb upstream 4050 true Tp57577_TGAC_v2_scaf_277: 30014-34063 Trifolium pratense
Tp57577_TGAC_v2_gene8238 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_277: 33064-34063 Trifolium pratense
Tp57577_TGAC_v2_gene8238 1.0kb downstream 1.0kb downstream 4050 true Tp57577_TGAC_v2_scaf_277: 29014-33063 Trifolium pratense
Tp57577_TGAC_v2_gene8238 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_277: 29014-30013 Trifolium pratense
Tp57577_TGAC_v2_gene8238 2.0kb upstream 2.0kb upstream 5050 true Tp57577_TGAC_v2_scaf_277: 30014-35063 Trifolium pratense
Tp57577_TGAC_v2_gene8238 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_277: 33064-35063 Trifolium pratense
Tp57577_TGAC_v2_gene8238 2.0kb downstream 2.0kb downstream 5050 true Tp57577_TGAC_v2_scaf_277: 28014-33063 Trifolium pratense
Tp57577_TGAC_v2_gene8238 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_277: 28014-30013 Trifolium pratense
Tp57577_TGAC_v2_gene8238 5.0kb upstream 5.0kb upstream 8050 true Tp57577_TGAC_v2_scaf_277: 30014-38063 Trifolium pratense
Tp57577_TGAC_v2_gene8238 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_277: 33064-38063 Trifolium pratense
Tp57577_TGAC_v2_gene8238 5.0kb downstream 5.0kb downstream 8050 true Tp57577_TGAC_v2_scaf_277: 25014-33063 Trifolium pratense
Tp57577_TGAC_v2_gene8238 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_277: 25014-30013 Trifolium pratense
Tp57577_TGAC_v2_gene8238 10.0kb upstream 10.0kb upstream 13050 true Tp57577_TGAC_v2_scaf_277: 30014-43063 Trifolium pratense
Tp57577_TGAC_v2_gene8238 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_277: 33064-43063 Trifolium pratense
Tp57577_TGAC_v2_gene8238 10.0kb downstream 10.0kb downstream 13050 true Tp57577_TGAC_v2_scaf_277: 20014-33063 Trifolium pratense
Tp57577_TGAC_v2_gene8238 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_277: 20014-30013 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040928 5273 Angiosperm View MSA
122308369 5265 Fabidae View MSA
124070010 5270 Rosid View MSA
123744886 5271 Pentapetalae View MSA
122793061 5272 Eudicot View MSA
121350889 5274 Embryophyte View MSA
123426344 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain