Gene : Tp57577_TGAC_v2_gene11989 T. pratense v2
Defline:  (1 of 2) PTHR32295:SF33 - PROTEIN IQ-DOMAIN 21 Genomic Order:  2618
Name:  ? Tp57577_TGAC_v2_gene11989 Secondary Identifier:  ? PAC:35980103
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene11989 0.5kb upstream 0.5kb upstream 6217 true Tp57577_TGAC_v2_LG1: 22057736-22063952 Trifolium pratense
Tp57577_TGAC_v2_gene11989 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 22063453-22063952 Trifolium pratense
Tp57577_TGAC_v2_gene11989 0.5kb downstream 0.5kb downstream 6217 true Tp57577_TGAC_v2_LG1: 22057236-22063452 Trifolium pratense
Tp57577_TGAC_v2_gene11989 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 22057236-22057735 Trifolium pratense
Tp57577_TGAC_v2_gene11989 1.0kb upstream 1.0kb upstream 6717 true Tp57577_TGAC_v2_LG1: 22057736-22064452 Trifolium pratense
Tp57577_TGAC_v2_gene11989 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 22063453-22064452 Trifolium pratense
Tp57577_TGAC_v2_gene11989 1.0kb downstream 1.0kb downstream 6717 true Tp57577_TGAC_v2_LG1: 22056736-22063452 Trifolium pratense
Tp57577_TGAC_v2_gene11989 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 22056736-22057735 Trifolium pratense
Tp57577_TGAC_v2_gene11989 2.0kb upstream 2.0kb upstream 7717 true Tp57577_TGAC_v2_LG1: 22057736-22065452 Trifolium pratense
Tp57577_TGAC_v2_gene11989 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 22063453-22065452 Trifolium pratense
Tp57577_TGAC_v2_gene11989 2.0kb downstream 2.0kb downstream 7717 true Tp57577_TGAC_v2_LG1: 22055736-22063452 Trifolium pratense
Tp57577_TGAC_v2_gene11989 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 22055736-22057735 Trifolium pratense
Tp57577_TGAC_v2_gene11989 5.0kb upstream 5.0kb upstream 10717 true Tp57577_TGAC_v2_LG1: 22057736-22068452 Trifolium pratense
Tp57577_TGAC_v2_gene11989 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 22063453-22068452 Trifolium pratense
Tp57577_TGAC_v2_gene11989 5.0kb downstream 5.0kb downstream 10717 true Tp57577_TGAC_v2_LG1: 22052736-22063452 Trifolium pratense
Tp57577_TGAC_v2_gene11989 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 22052736-22057735 Trifolium pratense
Tp57577_TGAC_v2_gene11989 10.0kb upstream 10.0kb upstream 15717 true Tp57577_TGAC_v2_LG1: 22057736-22073452 Trifolium pratense
Tp57577_TGAC_v2_gene11989 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 22063453-22073452 Trifolium pratense
Tp57577_TGAC_v2_gene11989 10.0kb downstream 10.0kb downstream 15717 true Tp57577_TGAC_v2_LG1: 22047736-22063452 Trifolium pratense
Tp57577_TGAC_v2_gene11989 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 22047736-22057735 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311115 5265 Fabidae View MSA
124061154 5270 Rosid View MSA
123748738 5271 Pentapetalae View MSA
122793664 5272 Eudicot View MSA
122049723 5273 Angiosperm View MSA
121311558 5274 Embryophyte View MSA
123348838 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain