Gene : Tp57577_TGAC_v2_gene9441 T. pratense v2
Defline:  (1 of 2) K01733 - threonine synthase (thrC) Genomic Order:  3107
Name:  ? Tp57577_TGAC_v2_gene9441 Secondary Identifier:  ? PAC:35972343
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense HOMOSER-THRESYN-PWY Trifolium pratense pathologic  
Tpratense PWY-3001 Trifolium pratense pathologic  
Tpratense PWY-724 Trifolium pratense pathologic  
Tpratense THRESYN-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene9441 0.5kb upstream 0.5kb upstream 1962 true Tp57577_TGAC_v2_LG2: 28122094-28124055 Trifolium pratense
Tp57577_TGAC_v2_gene9441 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 28122094-28122593 Trifolium pratense
Tp57577_TGAC_v2_gene9441 0.5kb downstream 0.5kb downstream 1962 true Tp57577_TGAC_v2_LG2: 28122594-28124555 Trifolium pratense
Tp57577_TGAC_v2_gene9441 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 28124056-28124555 Trifolium pratense
Tp57577_TGAC_v2_gene9441 1.0kb upstream 1.0kb upstream 2462 true Tp57577_TGAC_v2_LG2: 28121594-28124055 Trifolium pratense
Tp57577_TGAC_v2_gene9441 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 28121594-28122593 Trifolium pratense
Tp57577_TGAC_v2_gene9441 1.0kb downstream 1.0kb downstream 2462 true Tp57577_TGAC_v2_LG2: 28122594-28125055 Trifolium pratense
Tp57577_TGAC_v2_gene9441 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 28124056-28125055 Trifolium pratense
Tp57577_TGAC_v2_gene9441 2.0kb upstream 2.0kb upstream 3462 true Tp57577_TGAC_v2_LG2: 28120594-28124055 Trifolium pratense
Tp57577_TGAC_v2_gene9441 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 28120594-28122593 Trifolium pratense
Tp57577_TGAC_v2_gene9441 2.0kb downstream 2.0kb downstream 3462 true Tp57577_TGAC_v2_LG2: 28122594-28126055 Trifolium pratense
Tp57577_TGAC_v2_gene9441 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 28124056-28126055 Trifolium pratense
Tp57577_TGAC_v2_gene9441 5.0kb upstream 5.0kb upstream 6462 true Tp57577_TGAC_v2_LG2: 28117594-28124055 Trifolium pratense
Tp57577_TGAC_v2_gene9441 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 28117594-28122593 Trifolium pratense
Tp57577_TGAC_v2_gene9441 5.0kb downstream 5.0kb downstream 6462 true Tp57577_TGAC_v2_LG2: 28122594-28129055 Trifolium pratense
Tp57577_TGAC_v2_gene9441 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 28124056-28129055 Trifolium pratense
Tp57577_TGAC_v2_gene9441 10.0kb upstream 10.0kb upstream 11462 true Tp57577_TGAC_v2_LG2: 28112594-28124055 Trifolium pratense
Tp57577_TGAC_v2_gene9441 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 28112594-28122593 Trifolium pratense
Tp57577_TGAC_v2_gene9441 10.0kb downstream 10.0kb downstream 11462 true Tp57577_TGAC_v2_LG2: 28122594-28134055 Trifolium pratense
Tp57577_TGAC_v2_gene9441 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 28124056-28134055 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041159 5273 Angiosperm View MSA
122312223 5265 Fabidae View MSA
124069376 5270 Rosid View MSA
123748441 5271 Pentapetalae View MSA
122786729 5272 Eudicot View MSA
121349368 5274 Embryophyte View MSA
123424940 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain