Gene : Tp57577_TGAC_v2_gene9434 T. pratense v2
Defline:  (1 of 1) PTHR22893:SF67 - 12-OXOPHYTODIENOATE REDUCTASE 3 Genomic Order:  3094
Name:  ? Tp57577_TGAC_v2_gene9434 Secondary Identifier:  ? PAC:35971706
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-735 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene9434 0.5kb upstream 0.5kb upstream 3163 true Tp57577_TGAC_v2_LG2: 28018741-28021903 Trifolium pratense
Tp57577_TGAC_v2_gene9434 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 28021404-28021903 Trifolium pratense
Tp57577_TGAC_v2_gene9434 0.5kb downstream 0.5kb downstream 3163 true Tp57577_TGAC_v2_LG2: 28018241-28021403 Trifolium pratense
Tp57577_TGAC_v2_gene9434 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 28018241-28018740 Trifolium pratense
Tp57577_TGAC_v2_gene9434 1.0kb upstream 1.0kb upstream 3663 true Tp57577_TGAC_v2_LG2: 28018741-28022403 Trifolium pratense
Tp57577_TGAC_v2_gene9434 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 28021404-28022403 Trifolium pratense
Tp57577_TGAC_v2_gene9434 1.0kb downstream 1.0kb downstream 3663 true Tp57577_TGAC_v2_LG2: 28017741-28021403 Trifolium pratense
Tp57577_TGAC_v2_gene9434 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 28017741-28018740 Trifolium pratense
Tp57577_TGAC_v2_gene9434 2.0kb upstream 2.0kb upstream 4663 true Tp57577_TGAC_v2_LG2: 28018741-28023403 Trifolium pratense
Tp57577_TGAC_v2_gene9434 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 28021404-28023403 Trifolium pratense
Tp57577_TGAC_v2_gene9434 2.0kb downstream 2.0kb downstream 4663 true Tp57577_TGAC_v2_LG2: 28016741-28021403 Trifolium pratense
Tp57577_TGAC_v2_gene9434 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 28016741-28018740 Trifolium pratense
Tp57577_TGAC_v2_gene9434 5.0kb upstream 5.0kb upstream 7663 true Tp57577_TGAC_v2_LG2: 28018741-28026403 Trifolium pratense
Tp57577_TGAC_v2_gene9434 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 28021404-28026403 Trifolium pratense
Tp57577_TGAC_v2_gene9434 5.0kb downstream 5.0kb downstream 7663 true Tp57577_TGAC_v2_LG2: 28013741-28021403 Trifolium pratense
Tp57577_TGAC_v2_gene9434 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 28013741-28018740 Trifolium pratense
Tp57577_TGAC_v2_gene9434 10.0kb upstream 10.0kb upstream 12663 true Tp57577_TGAC_v2_LG2: 28018741-28031403 Trifolium pratense
Tp57577_TGAC_v2_gene9434 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 28021404-28031403 Trifolium pratense
Tp57577_TGAC_v2_gene9434 10.0kb downstream 10.0kb downstream 12663 true Tp57577_TGAC_v2_LG2: 28008741-28021403 Trifolium pratense
Tp57577_TGAC_v2_gene9434 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 28008741-28018740 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305321 5265 Fabidae View MSA
124067438 5270 Rosid View MSA
123752843 5271 Pentapetalae View MSA
122793200 5272 Eudicot View MSA
122045758 5273 Angiosperm View MSA
121351640 5274 Embryophyte View MSA
123428487 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain