Gene : Tp57577_TGAC_v2_gene32144 T. pratense v2
Defline:  (1 of 14) PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  13
Name:  ? Tp57577_TGAC_v2_gene32144 Secondary Identifier:  ? PAC:35969024
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene32144 0.5kb upstream 0.5kb upstream 4017 true Tp57577_TGAC_v2_scaf_192: 103214-107230 Trifolium pratense
Tp57577_TGAC_v2_gene32144 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_192: 103214-103713 Trifolium pratense
Tp57577_TGAC_v2_gene32144 0.5kb downstream 0.5kb downstream 4017 true Tp57577_TGAC_v2_scaf_192: 103714-107730 Trifolium pratense
Tp57577_TGAC_v2_gene32144 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_192: 107231-107730 Trifolium pratense
Tp57577_TGAC_v2_gene32144 1.0kb upstream 1.0kb upstream 4517 true Tp57577_TGAC_v2_scaf_192: 102714-107230 Trifolium pratense
Tp57577_TGAC_v2_gene32144 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_192: 102714-103713 Trifolium pratense
Tp57577_TGAC_v2_gene32144 1.0kb downstream 1.0kb downstream 4517 true Tp57577_TGAC_v2_scaf_192: 103714-108230 Trifolium pratense
Tp57577_TGAC_v2_gene32144 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_192: 107231-108230 Trifolium pratense
Tp57577_TGAC_v2_gene32144 2.0kb upstream 2.0kb upstream 5517 true Tp57577_TGAC_v2_scaf_192: 101714-107230 Trifolium pratense
Tp57577_TGAC_v2_gene32144 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_192: 101714-103713 Trifolium pratense
Tp57577_TGAC_v2_gene32144 2.0kb downstream 2.0kb downstream 5517 true Tp57577_TGAC_v2_scaf_192: 103714-109230 Trifolium pratense
Tp57577_TGAC_v2_gene32144 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_192: 107231-109230 Trifolium pratense
Tp57577_TGAC_v2_gene32144 5.0kb upstream 5.0kb upstream 8517 true Tp57577_TGAC_v2_scaf_192: 98714-107230 Trifolium pratense
Tp57577_TGAC_v2_gene32144 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_192: 98714-103713 Trifolium pratense
Tp57577_TGAC_v2_gene32144 5.0kb downstream 5.0kb downstream 8517 true Tp57577_TGAC_v2_scaf_192: 103714-112230 Trifolium pratense
Tp57577_TGAC_v2_gene32144 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_192: 107231-112230 Trifolium pratense
Tp57577_TGAC_v2_gene32144 10.0kb upstream 10.0kb upstream 13517 true Tp57577_TGAC_v2_scaf_192: 93714-107230 Trifolium pratense
Tp57577_TGAC_v2_gene32144 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_192: 93714-103713 Trifolium pratense
Tp57577_TGAC_v2_gene32144 10.0kb downstream 10.0kb downstream 13517 true Tp57577_TGAC_v2_scaf_192: 103714-117230 Trifolium pratense
Tp57577_TGAC_v2_gene32144 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_192: 107231-117230 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304708 5265 Fabidae View MSA
124062625 5270 Rosid View MSA
123739540 5271 Pentapetalae View MSA
122790225 5272 Eudicot View MSA
122049132 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain