Gene : Tp57577_TGAC_v2_gene9473 T. pratense v2
Defline:  (1 of 7) PF05553//PF14364 - Cotton fibre expressed protein (DUF761) // Domain of unknown function (DUF4408) (DUF4408) Genomic Order:  3136
Name:  ? Tp57577_TGAC_v2_gene9473 Secondary Identifier:  ? PAC:35970245
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene9473 0.5kb upstream 0.5kb upstream 1643 true Tp57577_TGAC_v2_LG2: 28312651-28314293 Trifolium pratense
Tp57577_TGAC_v2_gene9473 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 28313794-28314293 Trifolium pratense
Tp57577_TGAC_v2_gene9473 0.5kb downstream 0.5kb downstream 1643 true Tp57577_TGAC_v2_LG2: 28312151-28313793 Trifolium pratense
Tp57577_TGAC_v2_gene9473 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 28312151-28312650 Trifolium pratense
Tp57577_TGAC_v2_gene9473 1.0kb upstream 1.0kb upstream 2143 true Tp57577_TGAC_v2_LG2: 28312651-28314793 Trifolium pratense
Tp57577_TGAC_v2_gene9473 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 28313794-28314793 Trifolium pratense
Tp57577_TGAC_v2_gene9473 1.0kb downstream 1.0kb downstream 2143 true Tp57577_TGAC_v2_LG2: 28311651-28313793 Trifolium pratense
Tp57577_TGAC_v2_gene9473 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 28311651-28312650 Trifolium pratense
Tp57577_TGAC_v2_gene9473 2.0kb upstream 2.0kb upstream 3143 true Tp57577_TGAC_v2_LG2: 28312651-28315793 Trifolium pratense
Tp57577_TGAC_v2_gene9473 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 28313794-28315793 Trifolium pratense
Tp57577_TGAC_v2_gene9473 2.0kb downstream 2.0kb downstream 3143 true Tp57577_TGAC_v2_LG2: 28310651-28313793 Trifolium pratense
Tp57577_TGAC_v2_gene9473 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 28310651-28312650 Trifolium pratense
Tp57577_TGAC_v2_gene9473 5.0kb upstream 5.0kb upstream 6143 true Tp57577_TGAC_v2_LG2: 28312651-28318793 Trifolium pratense
Tp57577_TGAC_v2_gene9473 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 28313794-28318793 Trifolium pratense
Tp57577_TGAC_v2_gene9473 5.0kb downstream 5.0kb downstream 6143 true Tp57577_TGAC_v2_LG2: 28307651-28313793 Trifolium pratense
Tp57577_TGAC_v2_gene9473 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 28307651-28312650 Trifolium pratense
Tp57577_TGAC_v2_gene9473 10.0kb upstream 10.0kb upstream 11143 true Tp57577_TGAC_v2_LG2: 28312651-28323793 Trifolium pratense
Tp57577_TGAC_v2_gene9473 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 28313794-28323793 Trifolium pratense
Tp57577_TGAC_v2_gene9473 10.0kb downstream 10.0kb downstream 11143 true Tp57577_TGAC_v2_LG2: 28302651-28313793 Trifolium pratense
Tp57577_TGAC_v2_gene9473 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 28302651-28312650 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309435 5265 Fabidae View MSA
124071784 5270 Rosid View MSA
123749105 5271 Pentapetalae View MSA
122787298 5272 Eudicot View MSA
122041618 5273 Angiosperm View MSA
121309871 5274 Embryophyte View MSA
123347511 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain