Gene : Tp57577_TGAC_v2_gene12066 T. pratense v2
Defline:  (1 of 3) PTHR23023:SF37 - INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA2-RELATED Genomic Order:  2634
Name:  ? Tp57577_TGAC_v2_gene12066 Secondary Identifier:  ? PAC:35980961
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWYDQC-4 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene12066 0.5kb upstream 0.5kb upstream 5823 true Tp57577_TGAC_v2_LG1: 22223650-22229472 Trifolium pratense
Tp57577_TGAC_v2_gene12066 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 22228973-22229472 Trifolium pratense
Tp57577_TGAC_v2_gene12066 0.5kb downstream 0.5kb downstream 5823 true Tp57577_TGAC_v2_LG1: 22223150-22228972 Trifolium pratense
Tp57577_TGAC_v2_gene12066 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 22223150-22223649 Trifolium pratense
Tp57577_TGAC_v2_gene12066 1.0kb upstream 1.0kb upstream 6323 true Tp57577_TGAC_v2_LG1: 22223650-22229972 Trifolium pratense
Tp57577_TGAC_v2_gene12066 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 22228973-22229972 Trifolium pratense
Tp57577_TGAC_v2_gene12066 1.0kb downstream 1.0kb downstream 6323 true Tp57577_TGAC_v2_LG1: 22222650-22228972 Trifolium pratense
Tp57577_TGAC_v2_gene12066 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 22222650-22223649 Trifolium pratense
Tp57577_TGAC_v2_gene12066 2.0kb upstream 2.0kb upstream 7323 true Tp57577_TGAC_v2_LG1: 22223650-22230972 Trifolium pratense
Tp57577_TGAC_v2_gene12066 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 22228973-22230972 Trifolium pratense
Tp57577_TGAC_v2_gene12066 2.0kb downstream 2.0kb downstream 7323 true Tp57577_TGAC_v2_LG1: 22221650-22228972 Trifolium pratense
Tp57577_TGAC_v2_gene12066 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 22221650-22223649 Trifolium pratense
Tp57577_TGAC_v2_gene12066 5.0kb upstream 5.0kb upstream 10323 true Tp57577_TGAC_v2_LG1: 22223650-22233972 Trifolium pratense
Tp57577_TGAC_v2_gene12066 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 22228973-22233972 Trifolium pratense
Tp57577_TGAC_v2_gene12066 5.0kb downstream 5.0kb downstream 10323 true Tp57577_TGAC_v2_LG1: 22218650-22228972 Trifolium pratense
Tp57577_TGAC_v2_gene12066 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 22218650-22223649 Trifolium pratense
Tp57577_TGAC_v2_gene12066 10.0kb upstream 10.0kb upstream 15323 true Tp57577_TGAC_v2_LG1: 22223650-22238972 Trifolium pratense
Tp57577_TGAC_v2_gene12066 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 22228973-22238972 Trifolium pratense
Tp57577_TGAC_v2_gene12066 10.0kb downstream 10.0kb downstream 15323 true Tp57577_TGAC_v2_LG1: 22213650-22228972 Trifolium pratense
Tp57577_TGAC_v2_gene12066 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 22213650-22223649 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311336 5265 Fabidae View MSA
124069370 5270 Rosid View MSA
123747095 5271 Pentapetalae View MSA
122790040 5272 Eudicot View MSA
122050610 5273 Angiosperm View MSA
121351632 5274 Embryophyte View MSA
123426700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain