Gene : Tp57577_TGAC_v2_gene30627 T. pratense v2
Defline:  (1 of 1) K00284 - glutamate synthase (ferredoxin) (E1.4.7.1) Genomic Order:  4
Name:  ? Tp57577_TGAC_v2_gene30627 Secondary Identifier:  ? PAC:35951794
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense CITRULBIO-PWY Trifolium pratense pathologic  
Tpratense GLUTAMINDEG-PWY Trifolium pratense pathologic  
Tpratense PWY-3282 Trifolium pratense pathologic  
Tpratense PWY-4341 Trifolium pratense pathologic  
Tpratense PWY-6549 Trifolium pratense pathologic  
Tpratense PWY-6964 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene30627 0.5kb upstream 0.5kb upstream 20730 true Tp57577_TGAC_v2_scaf_495: 47896-68625 Trifolium pratense
Tp57577_TGAC_v2_gene30627 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_495: 47896-48395 Trifolium pratense
Tp57577_TGAC_v2_gene30627 0.5kb downstream 0.5kb downstream 20730 true Tp57577_TGAC_v2_scaf_495: 48396-69125 Trifolium pratense
Tp57577_TGAC_v2_gene30627 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_495: 68626-69125 Trifolium pratense
Tp57577_TGAC_v2_gene30627 1.0kb upstream 1.0kb upstream 21230 true Tp57577_TGAC_v2_scaf_495: 47396-68625 Trifolium pratense
Tp57577_TGAC_v2_gene30627 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_495: 47396-48395 Trifolium pratense
Tp57577_TGAC_v2_gene30627 1.0kb downstream 1.0kb downstream 21230 true Tp57577_TGAC_v2_scaf_495: 48396-69625 Trifolium pratense
Tp57577_TGAC_v2_gene30627 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_495: 68626-69625 Trifolium pratense
Tp57577_TGAC_v2_gene30627 2.0kb upstream 2.0kb upstream 22230 true Tp57577_TGAC_v2_scaf_495: 46396-68625 Trifolium pratense
Tp57577_TGAC_v2_gene30627 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_495: 46396-48395 Trifolium pratense
Tp57577_TGAC_v2_gene30627 2.0kb downstream 2.0kb downstream 22230 true Tp57577_TGAC_v2_scaf_495: 48396-70625 Trifolium pratense
Tp57577_TGAC_v2_gene30627 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_495: 68626-70625 Trifolium pratense
Tp57577_TGAC_v2_gene30627 5.0kb upstream 5.0kb upstream 25230 true Tp57577_TGAC_v2_scaf_495: 43396-68625 Trifolium pratense
Tp57577_TGAC_v2_gene30627 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_495: 43396-48395 Trifolium pratense
Tp57577_TGAC_v2_gene30627 5.0kb downstream 5.0kb downstream 25230 true Tp57577_TGAC_v2_scaf_495: 48396-73625 Trifolium pratense
Tp57577_TGAC_v2_gene30627 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_495: 68626-73625 Trifolium pratense
Tp57577_TGAC_v2_gene30627 10.0kb upstream 10.0kb upstream 30230 true Tp57577_TGAC_v2_scaf_495: 38396-68625 Trifolium pratense
Tp57577_TGAC_v2_gene30627 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_495: 38396-48395 Trifolium pratense
Tp57577_TGAC_v2_gene30627 10.0kb downstream 10.0kb downstream 30230 true Tp57577_TGAC_v2_scaf_495: 48396-78625 Trifolium pratense
Tp57577_TGAC_v2_gene30627 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_495: 68626-78625 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041031 5273 Angiosperm View MSA
122301808 5265 Fabidae View MSA
124064283 5270 Rosid View MSA
123736436 5271 Pentapetalae View MSA
122793515 5272 Eudicot View MSA
121351458 5274 Embryophyte View MSA
123425051 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain