Gene : Tp57577_TGAC_v2_gene15648 T. pratense v2
Defline:  (1 of 59) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  2788
Name:  ? Tp57577_TGAC_v2_gene15648 Secondary Identifier:  ? PAC:35981370
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene15648 0.5kb upstream 0.5kb upstream 3505 true Tp57577_TGAC_v2_LG1: 23398755-23402259 Trifolium pratense
Tp57577_TGAC_v2_gene15648 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 23398755-23399254 Trifolium pratense
Tp57577_TGAC_v2_gene15648 0.5kb downstream 0.5kb downstream 3505 true Tp57577_TGAC_v2_LG1: 23399255-23402759 Trifolium pratense
Tp57577_TGAC_v2_gene15648 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 23402260-23402759 Trifolium pratense
Tp57577_TGAC_v2_gene15648 1.0kb upstream 1.0kb upstream 4005 true Tp57577_TGAC_v2_LG1: 23398255-23402259 Trifolium pratense
Tp57577_TGAC_v2_gene15648 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 23398255-23399254 Trifolium pratense
Tp57577_TGAC_v2_gene15648 1.0kb downstream 1.0kb downstream 4005 true Tp57577_TGAC_v2_LG1: 23399255-23403259 Trifolium pratense
Tp57577_TGAC_v2_gene15648 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 23402260-23403259 Trifolium pratense
Tp57577_TGAC_v2_gene15648 2.0kb upstream 2.0kb upstream 5005 true Tp57577_TGAC_v2_LG1: 23397255-23402259 Trifolium pratense
Tp57577_TGAC_v2_gene15648 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 23397255-23399254 Trifolium pratense
Tp57577_TGAC_v2_gene15648 2.0kb downstream 2.0kb downstream 5005 true Tp57577_TGAC_v2_LG1: 23399255-23404259 Trifolium pratense
Tp57577_TGAC_v2_gene15648 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 23402260-23404259 Trifolium pratense
Tp57577_TGAC_v2_gene15648 5.0kb upstream 5.0kb upstream 8005 true Tp57577_TGAC_v2_LG1: 23394255-23402259 Trifolium pratense
Tp57577_TGAC_v2_gene15648 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 23394255-23399254 Trifolium pratense
Tp57577_TGAC_v2_gene15648 5.0kb downstream 5.0kb downstream 8005 true Tp57577_TGAC_v2_LG1: 23399255-23407259 Trifolium pratense
Tp57577_TGAC_v2_gene15648 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 23402260-23407259 Trifolium pratense
Tp57577_TGAC_v2_gene15648 10.0kb upstream 10.0kb upstream 13005 true Tp57577_TGAC_v2_LG1: 23389255-23402259 Trifolium pratense
Tp57577_TGAC_v2_gene15648 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 23389255-23399254 Trifolium pratense
Tp57577_TGAC_v2_gene15648 10.0kb downstream 10.0kb downstream 13005 true Tp57577_TGAC_v2_LG1: 23399255-23412259 Trifolium pratense
Tp57577_TGAC_v2_gene15648 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 23402260-23412259 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301504 5265 Fabidae View MSA
124072779 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain