Gene : Tp57577_TGAC_v2_gene9105 T. pratense v2
Defline:  (1 of 4) PTHR22811//PTHR22811:SF68 - TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  10
Name:  ? Tp57577_TGAC_v2_gene9105 Secondary Identifier:  ? PAC:35967730
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene9105 0.5kb upstream 0.5kb upstream 3507 true Tp57577_TGAC_v2_scaf_529: 111204-114710 Trifolium pratense
Tp57577_TGAC_v2_gene9105 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_529: 111204-111703 Trifolium pratense
Tp57577_TGAC_v2_gene9105 0.5kb downstream 0.5kb downstream 3507 true Tp57577_TGAC_v2_scaf_529: 111704-115210 Trifolium pratense
Tp57577_TGAC_v2_gene9105 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_529: 114711-115210 Trifolium pratense
Tp57577_TGAC_v2_gene9105 1.0kb upstream 1.0kb upstream 4007 true Tp57577_TGAC_v2_scaf_529: 110704-114710 Trifolium pratense
Tp57577_TGAC_v2_gene9105 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_529: 110704-111703 Trifolium pratense
Tp57577_TGAC_v2_gene9105 1.0kb downstream 1.0kb downstream 4007 true Tp57577_TGAC_v2_scaf_529: 111704-115710 Trifolium pratense
Tp57577_TGAC_v2_gene9105 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_529: 114711-115710 Trifolium pratense
Tp57577_TGAC_v2_gene9105 2.0kb upstream 2.0kb upstream 5007 true Tp57577_TGAC_v2_scaf_529: 109704-114710 Trifolium pratense
Tp57577_TGAC_v2_gene9105 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_529: 109704-111703 Trifolium pratense
Tp57577_TGAC_v2_gene9105 2.0kb downstream 2.0kb downstream 5007 true Tp57577_TGAC_v2_scaf_529: 111704-116710 Trifolium pratense
Tp57577_TGAC_v2_gene9105 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_529: 114711-116710 Trifolium pratense
Tp57577_TGAC_v2_gene9105 5.0kb upstream 5.0kb upstream 8007 true Tp57577_TGAC_v2_scaf_529: 106704-114710 Trifolium pratense
Tp57577_TGAC_v2_gene9105 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_529: 106704-111703 Trifolium pratense
Tp57577_TGAC_v2_gene9105 5.0kb downstream 5.0kb downstream 8007 true Tp57577_TGAC_v2_scaf_529: 111704-119710 Trifolium pratense
Tp57577_TGAC_v2_gene9105 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_529: 114711-119710 Trifolium pratense
Tp57577_TGAC_v2_gene9105 10.0kb upstream 10.0kb upstream 13007 true Tp57577_TGAC_v2_scaf_529: 101704-114710 Trifolium pratense
Tp57577_TGAC_v2_gene9105 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_529: 101704-111703 Trifolium pratense
Tp57577_TGAC_v2_gene9105 10.0kb downstream 10.0kb downstream 13007 true Tp57577_TGAC_v2_scaf_529: 111704-124710 Trifolium pratense
Tp57577_TGAC_v2_gene9105 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_529: 114711-124710 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297897 5265 Fabidae View MSA
124065325 5270 Rosid View MSA
123743210 5271 Pentapetalae View MSA
122786619 5272 Eudicot View MSA
122045643 5273 Angiosperm View MSA
121349336 5274 Embryophyte View MSA
123428181 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain