Gene : Tp57577_TGAC_v2_gene30858 T. pratense v2
Defline:  (1 of 2) PTHR33271:SF3 - CUPIN DOMAIN-CONTAINING PROTEIN Genomic Order:  6
Name:  ? Tp57577_TGAC_v2_gene30858 Secondary Identifier:  ? PAC:35967342
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene30858 0.5kb upstream 0.5kb upstream 1189 true Tp57577_TGAC_v2_scaf_789: 70157-71345 Trifolium pratense
Tp57577_TGAC_v2_gene30858 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_789: 70846-71345 Trifolium pratense
Tp57577_TGAC_v2_gene30858 0.5kb downstream 0.5kb downstream 1189 true Tp57577_TGAC_v2_scaf_789: 69657-70845 Trifolium pratense
Tp57577_TGAC_v2_gene30858 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_789: 69657-70156 Trifolium pratense
Tp57577_TGAC_v2_gene30858 1.0kb upstream 1.0kb upstream 1689 true Tp57577_TGAC_v2_scaf_789: 70157-71845 Trifolium pratense
Tp57577_TGAC_v2_gene30858 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_789: 70846-71845 Trifolium pratense
Tp57577_TGAC_v2_gene30858 1.0kb downstream 1.0kb downstream 1689 true Tp57577_TGAC_v2_scaf_789: 69157-70845 Trifolium pratense
Tp57577_TGAC_v2_gene30858 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_789: 69157-70156 Trifolium pratense
Tp57577_TGAC_v2_gene30858 2.0kb upstream 2.0kb upstream 2689 true Tp57577_TGAC_v2_scaf_789: 70157-72845 Trifolium pratense
Tp57577_TGAC_v2_gene30858 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_789: 70846-72845 Trifolium pratense
Tp57577_TGAC_v2_gene30858 2.0kb downstream 2.0kb downstream 2689 true Tp57577_TGAC_v2_scaf_789: 68157-70845 Trifolium pratense
Tp57577_TGAC_v2_gene30858 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_789: 68157-70156 Trifolium pratense
Tp57577_TGAC_v2_gene30858 5.0kb upstream 5.0kb upstream 5689 true Tp57577_TGAC_v2_scaf_789: 70157-75845 Trifolium pratense
Tp57577_TGAC_v2_gene30858 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_789: 70846-75845 Trifolium pratense
Tp57577_TGAC_v2_gene30858 5.0kb downstream 5.0kb downstream 5689 true Tp57577_TGAC_v2_scaf_789: 65157-70845 Trifolium pratense
Tp57577_TGAC_v2_gene30858 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_789: 65157-70156 Trifolium pratense
Tp57577_TGAC_v2_gene30858 10.0kb upstream 10.0kb upstream 10689 true Tp57577_TGAC_v2_scaf_789: 70157-80845 Trifolium pratense
Tp57577_TGAC_v2_gene30858 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_789: 70846-80845 Trifolium pratense
Tp57577_TGAC_v2_gene30858 10.0kb downstream 10.0kb downstream 10689 true Tp57577_TGAC_v2_scaf_789: 60157-70845 Trifolium pratense
Tp57577_TGAC_v2_gene30858 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_789: 60157-70156 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315039 5265 Fabidae View MSA
124060878 5270 Rosid View MSA
123742997 5271 Pentapetalae View MSA
122793157 5272 Eudicot View MSA
122044635 5273 Angiosperm View MSA
121350768 5274 Embryophyte View MSA
123425697 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain