Gene : Tp57577_TGAC_v2_gene13399 T. pratense v2
Defline:  (1 of 2) PTHR13697:SF33 - 6-PHOSPHOFRUCTOKINASE 4, CHLOROPLASTIC Genomic Order:  2194
Name:  ? Tp57577_TGAC_v2_gene13399 Secondary Identifier:  ? PAC:35978475
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense ANAEROFRUCAT-PWY Trifolium pratense pathologic  
Tpratense ANAGLYCOLYSIS-PWY Trifolium pratense pathologic  
Tpratense PWY-1042 Trifolium pratense pathologic  
Tpratense PWY-5464 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene13399 0.5kb upstream 0.5kb upstream 7465 true Tp57577_TGAC_v2_LG1: 18530625-18538089 Trifolium pratense
Tp57577_TGAC_v2_gene13399 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 18530625-18531124 Trifolium pratense
Tp57577_TGAC_v2_gene13399 0.5kb downstream 0.5kb downstream 7465 true Tp57577_TGAC_v2_LG1: 18531125-18538589 Trifolium pratense
Tp57577_TGAC_v2_gene13399 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 18538090-18538589 Trifolium pratense
Tp57577_TGAC_v2_gene13399 1.0kb upstream 1.0kb upstream 7965 true Tp57577_TGAC_v2_LG1: 18530125-18538089 Trifolium pratense
Tp57577_TGAC_v2_gene13399 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 18530125-18531124 Trifolium pratense
Tp57577_TGAC_v2_gene13399 1.0kb downstream 1.0kb downstream 7965 true Tp57577_TGAC_v2_LG1: 18531125-18539089 Trifolium pratense
Tp57577_TGAC_v2_gene13399 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 18538090-18539089 Trifolium pratense
Tp57577_TGAC_v2_gene13399 2.0kb upstream 2.0kb upstream 8965 true Tp57577_TGAC_v2_LG1: 18529125-18538089 Trifolium pratense
Tp57577_TGAC_v2_gene13399 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 18529125-18531124 Trifolium pratense
Tp57577_TGAC_v2_gene13399 2.0kb downstream 2.0kb downstream 8965 true Tp57577_TGAC_v2_LG1: 18531125-18540089 Trifolium pratense
Tp57577_TGAC_v2_gene13399 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 18538090-18540089 Trifolium pratense
Tp57577_TGAC_v2_gene13399 5.0kb upstream 5.0kb upstream 11965 true Tp57577_TGAC_v2_LG1: 18526125-18538089 Trifolium pratense
Tp57577_TGAC_v2_gene13399 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 18526125-18531124 Trifolium pratense
Tp57577_TGAC_v2_gene13399 5.0kb downstream 5.0kb downstream 11965 true Tp57577_TGAC_v2_LG1: 18531125-18543089 Trifolium pratense
Tp57577_TGAC_v2_gene13399 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 18538090-18543089 Trifolium pratense
Tp57577_TGAC_v2_gene13399 10.0kb upstream 10.0kb upstream 16965 true Tp57577_TGAC_v2_LG1: 18521125-18538089 Trifolium pratense
Tp57577_TGAC_v2_gene13399 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 18521125-18531124 Trifolium pratense
Tp57577_TGAC_v2_gene13399 10.0kb downstream 10.0kb downstream 16965 true Tp57577_TGAC_v2_LG1: 18531125-18548089 Trifolium pratense
Tp57577_TGAC_v2_gene13399 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 18538090-18548089 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306462 5265 Fabidae View MSA
124067240 5270 Rosid View MSA
123738988 5271 Pentapetalae View MSA
122769940 5272 Eudicot View MSA
122042097 5273 Angiosperm View MSA
121349898 5274 Embryophyte View MSA
123428795 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain