Gene : Tp57577_TGAC_v2_gene17116 T. pratense v2
Defline:  (1 of 3) K13456 - RPM1-interacting protein 4 (RIN4) Genomic Order:  19
Name:  ? Tp57577_TGAC_v2_gene17116 Secondary Identifier:  ? PAC:35986498
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene17116 0.5kb upstream 0.5kb upstream 5026 true Tp57577_TGAC_v2_scaf_233: 193076-198101 Trifolium pratense
Tp57577_TGAC_v2_gene17116 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_233: 193076-193575 Trifolium pratense
Tp57577_TGAC_v2_gene17116 0.5kb downstream 0.5kb downstream 5026 true Tp57577_TGAC_v2_scaf_233: 193576-198601 Trifolium pratense
Tp57577_TGAC_v2_gene17116 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_233: 198102-198601 Trifolium pratense
Tp57577_TGAC_v2_gene17116 1.0kb upstream 1.0kb upstream 5526 true Tp57577_TGAC_v2_scaf_233: 192576-198101 Trifolium pratense
Tp57577_TGAC_v2_gene17116 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_233: 192576-193575 Trifolium pratense
Tp57577_TGAC_v2_gene17116 1.0kb downstream 1.0kb downstream 5526 true Tp57577_TGAC_v2_scaf_233: 193576-199101 Trifolium pratense
Tp57577_TGAC_v2_gene17116 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_233: 198102-199101 Trifolium pratense
Tp57577_TGAC_v2_gene17116 2.0kb upstream 2.0kb upstream 6526 true Tp57577_TGAC_v2_scaf_233: 191576-198101 Trifolium pratense
Tp57577_TGAC_v2_gene17116 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_233: 191576-193575 Trifolium pratense
Tp57577_TGAC_v2_gene17116 2.0kb downstream 2.0kb downstream 6526 true Tp57577_TGAC_v2_scaf_233: 193576-200101 Trifolium pratense
Tp57577_TGAC_v2_gene17116 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_233: 198102-200101 Trifolium pratense
Tp57577_TGAC_v2_gene17116 5.0kb upstream 5.0kb upstream 9526 true Tp57577_TGAC_v2_scaf_233: 188576-198101 Trifolium pratense
Tp57577_TGAC_v2_gene17116 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_233: 188576-193575 Trifolium pratense
Tp57577_TGAC_v2_gene17116 5.0kb downstream 5.0kb downstream 9526 true Tp57577_TGAC_v2_scaf_233: 193576-203101 Trifolium pratense
Tp57577_TGAC_v2_gene17116 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_233: 198102-203101 Trifolium pratense
Tp57577_TGAC_v2_gene17116 10.0kb upstream 10.0kb upstream 14526 true Tp57577_TGAC_v2_scaf_233: 183576-198101 Trifolium pratense
Tp57577_TGAC_v2_gene17116 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_233: 183576-193575 Trifolium pratense
Tp57577_TGAC_v2_gene17116 10.0kb downstream 10.0kb downstream 14526 true Tp57577_TGAC_v2_scaf_233: 193576-208101 Trifolium pratense
Tp57577_TGAC_v2_gene17116 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_233: 198102-208101 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311528 5265 Fabidae View MSA
124074816 5270 Rosid View MSA
123749229 5271 Pentapetalae View MSA
122795391 5272 Eudicot View MSA
122048165 5273 Angiosperm View MSA
121344169 5274 Embryophyte View MSA
123379991 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain