Gene : Tp57577_TGAC_v2_gene30657 T. pratense v2
Defline:  (1 of 3) PTHR23344:SF8 - GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE-LIKE PROTEIN-RELATED Genomic Order:  10
Name:  ? Tp57577_TGAC_v2_gene30657 Secondary Identifier:  ? PAC:35991833
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7409 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene30657 0.5kb upstream 0.5kb upstream 5442 true Tp57577_TGAC_v2_scaf_496: 53984-59425 Trifolium pratense
Tp57577_TGAC_v2_gene30657 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_496: 58926-59425 Trifolium pratense
Tp57577_TGAC_v2_gene30657 0.5kb downstream 0.5kb downstream 5442 true Tp57577_TGAC_v2_scaf_496: 53484-58925 Trifolium pratense
Tp57577_TGAC_v2_gene30657 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_496: 53484-53983 Trifolium pratense
Tp57577_TGAC_v2_gene30657 1.0kb upstream 1.0kb upstream 5942 true Tp57577_TGAC_v2_scaf_496: 53984-59925 Trifolium pratense
Tp57577_TGAC_v2_gene30657 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_496: 58926-59925 Trifolium pratense
Tp57577_TGAC_v2_gene30657 1.0kb downstream 1.0kb downstream 5942 true Tp57577_TGAC_v2_scaf_496: 52984-58925 Trifolium pratense
Tp57577_TGAC_v2_gene30657 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_496: 52984-53983 Trifolium pratense
Tp57577_TGAC_v2_gene30657 2.0kb upstream 2.0kb upstream 6942 true Tp57577_TGAC_v2_scaf_496: 53984-60925 Trifolium pratense
Tp57577_TGAC_v2_gene30657 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_496: 58926-60925 Trifolium pratense
Tp57577_TGAC_v2_gene30657 2.0kb downstream 2.0kb downstream 6942 true Tp57577_TGAC_v2_scaf_496: 51984-58925 Trifolium pratense
Tp57577_TGAC_v2_gene30657 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_496: 51984-53983 Trifolium pratense
Tp57577_TGAC_v2_gene30657 5.0kb upstream 5.0kb upstream 9942 true Tp57577_TGAC_v2_scaf_496: 53984-63925 Trifolium pratense
Tp57577_TGAC_v2_gene30657 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_496: 58926-63925 Trifolium pratense
Tp57577_TGAC_v2_gene30657 5.0kb downstream 5.0kb downstream 9942 true Tp57577_TGAC_v2_scaf_496: 48984-58925 Trifolium pratense
Tp57577_TGAC_v2_gene30657 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_496: 48984-53983 Trifolium pratense
Tp57577_TGAC_v2_gene30657 10.0kb upstream 10.0kb upstream 14942 true Tp57577_TGAC_v2_scaf_496: 53984-68925 Trifolium pratense
Tp57577_TGAC_v2_gene30657 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_496: 58926-68925 Trifolium pratense
Tp57577_TGAC_v2_gene30657 10.0kb downstream 10.0kb downstream 14942 true Tp57577_TGAC_v2_scaf_496: 43984-58925 Trifolium pratense
Tp57577_TGAC_v2_gene30657 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_496: 43984-53983 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303493 5265 Fabidae View MSA
124064633 5270 Rosid View MSA
123747170 5271 Pentapetalae View MSA
122796977 5272 Eudicot View MSA
122046858 5273 Angiosperm View MSA
121349950 5274 Embryophyte View MSA
123381513 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain