Gene : Tp57577_TGAC_v2_gene32343 T. pratense v2
Defline:  (1 of 1) PTHR32010:SF6 - PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC Genomic Order:  26
Name:  ? Tp57577_TGAC_v2_gene32343 Secondary Identifier:  ? PAC:35992001
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene32343 0.5kb upstream 0.5kb upstream 6817 true Tp57577_TGAC_v2_scaf_198: 188935-195751 Trifolium pratense
Tp57577_TGAC_v2_gene32343 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_198: 188935-189434 Trifolium pratense
Tp57577_TGAC_v2_gene32343 0.5kb downstream 0.5kb downstream 6817 true Tp57577_TGAC_v2_scaf_198: 189435-196251 Trifolium pratense
Tp57577_TGAC_v2_gene32343 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_198: 195752-196251 Trifolium pratense
Tp57577_TGAC_v2_gene32343 1.0kb upstream 1.0kb upstream 7317 true Tp57577_TGAC_v2_scaf_198: 188435-195751 Trifolium pratense
Tp57577_TGAC_v2_gene32343 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_198: 188435-189434 Trifolium pratense
Tp57577_TGAC_v2_gene32343 1.0kb downstream 1.0kb downstream 7317 true Tp57577_TGAC_v2_scaf_198: 189435-196751 Trifolium pratense
Tp57577_TGAC_v2_gene32343 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_198: 195752-196751 Trifolium pratense
Tp57577_TGAC_v2_gene32343 2.0kb upstream 2.0kb upstream 8317 true Tp57577_TGAC_v2_scaf_198: 187435-195751 Trifolium pratense
Tp57577_TGAC_v2_gene32343 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_198: 187435-189434 Trifolium pratense
Tp57577_TGAC_v2_gene32343 2.0kb downstream 2.0kb downstream 8317 true Tp57577_TGAC_v2_scaf_198: 189435-197751 Trifolium pratense
Tp57577_TGAC_v2_gene32343 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_198: 195752-197751 Trifolium pratense
Tp57577_TGAC_v2_gene32343 5.0kb upstream 5.0kb upstream 11317 true Tp57577_TGAC_v2_scaf_198: 184435-195751 Trifolium pratense
Tp57577_TGAC_v2_gene32343 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_198: 184435-189434 Trifolium pratense
Tp57577_TGAC_v2_gene32343 5.0kb downstream 5.0kb downstream 11317 true Tp57577_TGAC_v2_scaf_198: 189435-200751 Trifolium pratense
Tp57577_TGAC_v2_gene32343 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_198: 195752-200751 Trifolium pratense
Tp57577_TGAC_v2_gene32343 10.0kb upstream 10.0kb upstream 16317 true Tp57577_TGAC_v2_scaf_198: 179435-195751 Trifolium pratense
Tp57577_TGAC_v2_gene32343 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_198: 179435-189434 Trifolium pratense
Tp57577_TGAC_v2_gene32343 10.0kb downstream 10.0kb downstream 16317 true Tp57577_TGAC_v2_scaf_198: 189435-205751 Trifolium pratense
Tp57577_TGAC_v2_gene32343 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_198: 195752-205751 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299617 5265 Fabidae View MSA
124062574 5270 Rosid View MSA
123745532 5271 Pentapetalae View MSA
122793353 5272 Eudicot View MSA
122042393 5273 Angiosperm View MSA
121345735 5274 Embryophyte View MSA
123424958 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain