Gene : Tp57577_TGAC_v2_gene13871 T. pratense v2
Defline:  (1 of 2) 1.1.1.95 - Phosphoglycerate dehydrogenase / Phosphoglyceric acid dehydrogenase Genomic Order:  266
Name:  ? Tp57577_TGAC_v2_gene13871 Secondary Identifier:  ? PAC:35978932
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense SER-GLYSYN-PWY Trifolium pratense pathologic  
Tpratense SERSYN-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene13871 0.5kb upstream 0.5kb upstream 4034 true Tp57577_TGAC_v2_LG1: 1947834-1951867 Trifolium pratense
Tp57577_TGAC_v2_gene13871 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 1951368-1951867 Trifolium pratense
Tp57577_TGAC_v2_gene13871 0.5kb downstream 0.5kb downstream 4034 true Tp57577_TGAC_v2_LG1: 1947334-1951367 Trifolium pratense
Tp57577_TGAC_v2_gene13871 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 1947334-1947833 Trifolium pratense
Tp57577_TGAC_v2_gene13871 1.0kb upstream 1.0kb upstream 4534 true Tp57577_TGAC_v2_LG1: 1947834-1952367 Trifolium pratense
Tp57577_TGAC_v2_gene13871 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 1951368-1952367 Trifolium pratense
Tp57577_TGAC_v2_gene13871 1.0kb downstream 1.0kb downstream 4534 true Tp57577_TGAC_v2_LG1: 1946834-1951367 Trifolium pratense
Tp57577_TGAC_v2_gene13871 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 1946834-1947833 Trifolium pratense
Tp57577_TGAC_v2_gene13871 2.0kb upstream 2.0kb upstream 5534 true Tp57577_TGAC_v2_LG1: 1947834-1953367 Trifolium pratense
Tp57577_TGAC_v2_gene13871 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 1951368-1953367 Trifolium pratense
Tp57577_TGAC_v2_gene13871 2.0kb downstream 2.0kb downstream 5534 true Tp57577_TGAC_v2_LG1: 1945834-1951367 Trifolium pratense
Tp57577_TGAC_v2_gene13871 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 1945834-1947833 Trifolium pratense
Tp57577_TGAC_v2_gene13871 5.0kb upstream 5.0kb upstream 8534 true Tp57577_TGAC_v2_LG1: 1947834-1956367 Trifolium pratense
Tp57577_TGAC_v2_gene13871 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 1951368-1956367 Trifolium pratense
Tp57577_TGAC_v2_gene13871 5.0kb downstream 5.0kb downstream 8534 true Tp57577_TGAC_v2_LG1: 1942834-1951367 Trifolium pratense
Tp57577_TGAC_v2_gene13871 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 1942834-1947833 Trifolium pratense
Tp57577_TGAC_v2_gene13871 10.0kb upstream 10.0kb upstream 13534 true Tp57577_TGAC_v2_LG1: 1947834-1961367 Trifolium pratense
Tp57577_TGAC_v2_gene13871 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 1951368-1961367 Trifolium pratense
Tp57577_TGAC_v2_gene13871 10.0kb downstream 10.0kb downstream 13534 true Tp57577_TGAC_v2_LG1: 1937834-1951367 Trifolium pratense
Tp57577_TGAC_v2_gene13871 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 1937834-1947833 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305922 5265 Fabidae View MSA
124071894 5270 Rosid View MSA
123750282 5271 Pentapetalae View MSA
122795023 5272 Eudicot View MSA
122044765 5273 Angiosperm View MSA
121347094 5274 Embryophyte View MSA
123427510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain