Gene : Tp57577_TGAC_v2_gene15342 T. pratense v2
Defline:  (1 of 4) K02964 - small subunit ribosomal protein S18e (RP-S18e, RPS18) Genomic Order:  4
Name:  ? Tp57577_TGAC_v2_gene15342 Secondary Identifier:  ? PAC:35960069
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene15342 0.5kb upstream 0.5kb upstream 2944 true Tp57577_TGAC_v2_scaf_588: 24333-27276 Trifolium pratense
Tp57577_TGAC_v2_gene15342 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_588: 24333-24832 Trifolium pratense
Tp57577_TGAC_v2_gene15342 0.5kb downstream 0.5kb downstream 2944 true Tp57577_TGAC_v2_scaf_588: 24833-27776 Trifolium pratense
Tp57577_TGAC_v2_gene15342 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_588: 27277-27776 Trifolium pratense
Tp57577_TGAC_v2_gene15342 1.0kb upstream 1.0kb upstream 3444 true Tp57577_TGAC_v2_scaf_588: 23833-27276 Trifolium pratense
Tp57577_TGAC_v2_gene15342 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_588: 23833-24832 Trifolium pratense
Tp57577_TGAC_v2_gene15342 1.0kb downstream 1.0kb downstream 3444 true Tp57577_TGAC_v2_scaf_588: 24833-28276 Trifolium pratense
Tp57577_TGAC_v2_gene15342 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_588: 27277-28276 Trifolium pratense
Tp57577_TGAC_v2_gene15342 2.0kb upstream 2.0kb upstream 4444 true Tp57577_TGAC_v2_scaf_588: 22833-27276 Trifolium pratense
Tp57577_TGAC_v2_gene15342 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_588: 22833-24832 Trifolium pratense
Tp57577_TGAC_v2_gene15342 2.0kb downstream 2.0kb downstream 4444 true Tp57577_TGAC_v2_scaf_588: 24833-29276 Trifolium pratense
Tp57577_TGAC_v2_gene15342 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_588: 27277-29276 Trifolium pratense
Tp57577_TGAC_v2_gene15342 5.0kb upstream 5.0kb upstream 7444 true Tp57577_TGAC_v2_scaf_588: 19833-27276 Trifolium pratense
Tp57577_TGAC_v2_gene15342 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_588: 19833-24832 Trifolium pratense
Tp57577_TGAC_v2_gene15342 5.0kb downstream 5.0kb downstream 7444 true Tp57577_TGAC_v2_scaf_588: 24833-32276 Trifolium pratense
Tp57577_TGAC_v2_gene15342 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_588: 27277-32276 Trifolium pratense
Tp57577_TGAC_v2_gene15342 10.0kb upstream 10.0kb upstream 12444 true Tp57577_TGAC_v2_scaf_588: 14833-27276 Trifolium pratense
Tp57577_TGAC_v2_gene15342 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_588: 14833-24832 Trifolium pratense
Tp57577_TGAC_v2_gene15342 10.0kb downstream 10.0kb downstream 12444 true Tp57577_TGAC_v2_scaf_588: 24833-37276 Trifolium pratense
Tp57577_TGAC_v2_gene15342 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_588: 27277-37276 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122287953 5265 Fabidae View MSA
124071434 5270 Rosid View MSA
123753104 5271 Pentapetalae View MSA
122796798 5272 Eudicot View MSA
122048414 5273 Angiosperm View MSA
121348769 5274 Embryophyte View MSA
123423828 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain