Gene : Tp57577_TGAC_v2_gene16776 T. pratense v2
Defline:  (1 of 1) PTHR12526:SF360 - SUCROSE-PHOSPHATE SYNTHASE 3-RELATED Genomic Order:  7
Name:  ? Tp57577_TGAC_v2_gene16776 Secondary Identifier:  ? PAC:35991675
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7238 Trifolium pratense pathologic  
Tpratense SUCSYN-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16776 0.5kb upstream 0.5kb upstream 6167 true Tp57577_TGAC_v2_scaf_256: 67346-73512 Trifolium pratense
Tp57577_TGAC_v2_gene16776 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_256: 67346-67845 Trifolium pratense
Tp57577_TGAC_v2_gene16776 0.5kb downstream 0.5kb downstream 6167 true Tp57577_TGAC_v2_scaf_256: 67846-74012 Trifolium pratense
Tp57577_TGAC_v2_gene16776 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_256: 73513-74012 Trifolium pratense
Tp57577_TGAC_v2_gene16776 1.0kb upstream 1.0kb upstream 6667 true Tp57577_TGAC_v2_scaf_256: 66846-73512 Trifolium pratense
Tp57577_TGAC_v2_gene16776 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_256: 66846-67845 Trifolium pratense
Tp57577_TGAC_v2_gene16776 1.0kb downstream 1.0kb downstream 6667 true Tp57577_TGAC_v2_scaf_256: 67846-74512 Trifolium pratense
Tp57577_TGAC_v2_gene16776 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_256: 73513-74512 Trifolium pratense
Tp57577_TGAC_v2_gene16776 2.0kb upstream 2.0kb upstream 7667 true Tp57577_TGAC_v2_scaf_256: 65846-73512 Trifolium pratense
Tp57577_TGAC_v2_gene16776 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_256: 65846-67845 Trifolium pratense
Tp57577_TGAC_v2_gene16776 2.0kb downstream 2.0kb downstream 7667 true Tp57577_TGAC_v2_scaf_256: 67846-75512 Trifolium pratense
Tp57577_TGAC_v2_gene16776 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_256: 73513-75512 Trifolium pratense
Tp57577_TGAC_v2_gene16776 5.0kb upstream 5.0kb upstream 10667 true Tp57577_TGAC_v2_scaf_256: 62846-73512 Trifolium pratense
Tp57577_TGAC_v2_gene16776 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_256: 62846-67845 Trifolium pratense
Tp57577_TGAC_v2_gene16776 5.0kb downstream 5.0kb downstream 10667 true Tp57577_TGAC_v2_scaf_256: 67846-78512 Trifolium pratense
Tp57577_TGAC_v2_gene16776 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_256: 73513-78512 Trifolium pratense
Tp57577_TGAC_v2_gene16776 10.0kb upstream 10.0kb upstream 15667 true Tp57577_TGAC_v2_scaf_256: 57846-73512 Trifolium pratense
Tp57577_TGAC_v2_gene16776 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_256: 57846-67845 Trifolium pratense
Tp57577_TGAC_v2_gene16776 10.0kb downstream 10.0kb downstream 15667 true Tp57577_TGAC_v2_scaf_256: 67846-83512 Trifolium pratense
Tp57577_TGAC_v2_gene16776 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_256: 73513-83512 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299377 5265 Fabidae View MSA
124060783 5270 Rosid View MSA
123737048 5271 Pentapetalae View MSA
122785600 5272 Eudicot View MSA
122049216 5273 Angiosperm View MSA
121347172 5274 Embryophyte View MSA
123427859 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain