Gene : Tp57577_TGAC_v2_gene1830 T. pratense v2
Defline:  (1 of 1) PTHR12875:SF0 - GOLGI TO ER TRAFFIC PROTEIN 4 HOMOLOG Genomic Order:  1873
Name:  ? Tp57577_TGAC_v2_gene1830 Secondary Identifier:  ? PAC:35979310
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene1830 0.5kb upstream 0.5kb upstream 3489 true Tp57577_TGAC_v2_LG1: 15660371-15663859 Trifolium pratense
Tp57577_TGAC_v2_gene1830 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 15663360-15663859 Trifolium pratense
Tp57577_TGAC_v2_gene1830 0.5kb downstream 0.5kb downstream 3489 true Tp57577_TGAC_v2_LG1: 15659871-15663359 Trifolium pratense
Tp57577_TGAC_v2_gene1830 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 15659871-15660370 Trifolium pratense
Tp57577_TGAC_v2_gene1830 1.0kb upstream 1.0kb upstream 3989 true Tp57577_TGAC_v2_LG1: 15660371-15664359 Trifolium pratense
Tp57577_TGAC_v2_gene1830 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 15663360-15664359 Trifolium pratense
Tp57577_TGAC_v2_gene1830 1.0kb downstream 1.0kb downstream 3989 true Tp57577_TGAC_v2_LG1: 15659371-15663359 Trifolium pratense
Tp57577_TGAC_v2_gene1830 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 15659371-15660370 Trifolium pratense
Tp57577_TGAC_v2_gene1830 2.0kb upstream 2.0kb upstream 4989 true Tp57577_TGAC_v2_LG1: 15660371-15665359 Trifolium pratense
Tp57577_TGAC_v2_gene1830 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 15663360-15665359 Trifolium pratense
Tp57577_TGAC_v2_gene1830 2.0kb downstream 2.0kb downstream 4989 true Tp57577_TGAC_v2_LG1: 15658371-15663359 Trifolium pratense
Tp57577_TGAC_v2_gene1830 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 15658371-15660370 Trifolium pratense
Tp57577_TGAC_v2_gene1830 5.0kb upstream 5.0kb upstream 7989 true Tp57577_TGAC_v2_LG1: 15660371-15668359 Trifolium pratense
Tp57577_TGAC_v2_gene1830 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 15663360-15668359 Trifolium pratense
Tp57577_TGAC_v2_gene1830 5.0kb downstream 5.0kb downstream 7989 true Tp57577_TGAC_v2_LG1: 15655371-15663359 Trifolium pratense
Tp57577_TGAC_v2_gene1830 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 15655371-15660370 Trifolium pratense
Tp57577_TGAC_v2_gene1830 10.0kb upstream 10.0kb upstream 12989 true Tp57577_TGAC_v2_LG1: 15660371-15673359 Trifolium pratense
Tp57577_TGAC_v2_gene1830 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 15663360-15673359 Trifolium pratense
Tp57577_TGAC_v2_gene1830 10.0kb downstream 10.0kb downstream 12989 true Tp57577_TGAC_v2_LG1: 15650371-15663359 Trifolium pratense
Tp57577_TGAC_v2_gene1830 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 15650371-15660370 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121643175 5273 Angiosperm Singleton cluster - no MSA
122282087 5265 Fabidae Singleton cluster - no MSA
124022602 5270 Rosid Singleton cluster - no MSA
123596440 5271 Pentapetalae Singleton cluster - no MSA
122631131 5272 Eudicot Singleton cluster - no MSA
120915278 5274 Embryophyte Singleton cluster - no MSA
122955927 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain