Gene : Tp57577_TGAC_v2_gene14519 T. pratense v2
Defline:  (1 of 6) PF03078 - ATHILA ORF-1 family (ATHILA) Genomic Order:  21
Name:  ? Tp57577_TGAC_v2_gene14519 Secondary Identifier:  ? PAC:35959589
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene14519 0.5kb upstream 0.5kb upstream 5341 true Tp57577_TGAC_v2_scaf_439: 153984-159324 Trifolium pratense
Tp57577_TGAC_v2_gene14519 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_439: 158825-159324 Trifolium pratense
Tp57577_TGAC_v2_gene14519 0.5kb downstream 0.5kb downstream 5341 true Tp57577_TGAC_v2_scaf_439: 153484-158824 Trifolium pratense
Tp57577_TGAC_v2_gene14519 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_439: 153484-153983 Trifolium pratense
Tp57577_TGAC_v2_gene14519 1.0kb upstream 1.0kb upstream 5841 true Tp57577_TGAC_v2_scaf_439: 153984-159824 Trifolium pratense
Tp57577_TGAC_v2_gene14519 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_439: 158825-159824 Trifolium pratense
Tp57577_TGAC_v2_gene14519 1.0kb downstream 1.0kb downstream 5841 true Tp57577_TGAC_v2_scaf_439: 152984-158824 Trifolium pratense
Tp57577_TGAC_v2_gene14519 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_439: 152984-153983 Trifolium pratense
Tp57577_TGAC_v2_gene14519 2.0kb upstream 2.0kb upstream 6841 true Tp57577_TGAC_v2_scaf_439: 153984-160824 Trifolium pratense
Tp57577_TGAC_v2_gene14519 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_439: 158825-160824 Trifolium pratense
Tp57577_TGAC_v2_gene14519 2.0kb downstream 2.0kb downstream 6841 true Tp57577_TGAC_v2_scaf_439: 151984-158824 Trifolium pratense
Tp57577_TGAC_v2_gene14519 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_439: 151984-153983 Trifolium pratense
Tp57577_TGAC_v2_gene14519 5.0kb upstream 5.0kb upstream 9841 true Tp57577_TGAC_v2_scaf_439: 153984-163824 Trifolium pratense
Tp57577_TGAC_v2_gene14519 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_439: 158825-163824 Trifolium pratense
Tp57577_TGAC_v2_gene14519 5.0kb downstream 5.0kb downstream 9841 true Tp57577_TGAC_v2_scaf_439: 148984-158824 Trifolium pratense
Tp57577_TGAC_v2_gene14519 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_439: 148984-153983 Trifolium pratense
Tp57577_TGAC_v2_gene14519 10.0kb upstream 10.0kb upstream 14841 true Tp57577_TGAC_v2_scaf_439: 153984-168824 Trifolium pratense
Tp57577_TGAC_v2_gene14519 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_439: 158825-168824 Trifolium pratense
Tp57577_TGAC_v2_gene14519 10.0kb downstream 10.0kb downstream 14841 true Tp57577_TGAC_v2_scaf_439: 143984-158824 Trifolium pratense
Tp57577_TGAC_v2_gene14519 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_439: 143984-153983 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121648464 5273 Angiosperm View MSA
122287383 5265 Fabidae View MSA
124027893 5270 Rosid View MSA
123601729 5271 Pentapetalae View MSA
122636420 5272 Eudicot View MSA
120920567 5274 Embryophyte View MSA
122961216 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain